Detailed information NTG0420439

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: IB936_RS04770
• Genome accession: NZ_CP061133
• Coordinates: 950730..951800 (-)
• Length: 356 a.a.
• NCBI ID: WP_002984598.1
• Uniprot ID: P0DH45
• Organism: Streptococcus pyogenes strain BSAC_bs472 isolate Invasive disease
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 945730..956800

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IB936_RS04750 (IB936_04750)	citX	946310..946888 (+)	579	WP_021299257.1	citrate lyase holo-[acyl-carrier protein] synthase	-
IB936_RS04755 (IB936_04755)	-	946903..948297 (+)	1395	WP_021299264.1	oxaloacetate decarboxylase subunit alpha	-
IB936_RS04760 (IB936_04760)	citC	948407..949459 (-)	1053	WP_011528662.1	[citrate (pro-3S)-lyase] ligase	-
IB936_RS04765 (IB936_04765)	-	949548..950030 (-)	483	WP_002984600.1	PASTA domain-containing protein	-
IB936_RS04770 (IB936_04770)	xerS	950730..951800 (-)	1071	WP_002984598.1	tyrosine recombinase XerS	Machinery gene
IB936_RS04775 (IB936_04775)	-	952274..952972 (+)	699	WP_011528664.1	XRE family transcriptional regulator	-
IB936_RS04780 (IB936_04780)	ffh	953089..954651 (-)	1563	WP_021299250.1	signal recognition particle protein	-
IB936_RS04785 (IB936_04785)	-	954666..954998 (-)	333	WP_002989745.1	putative DNA-binding protein	-
IB936_RS04790 (IB936_04790)	-	955096..955794 (-)	699	WP_021299253.1	GntR family transcriptional regulator	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41471.57 Da
• Isoelectric Point: 9.5552

>NTDB_id=420439 IB936_RS04770 WP_002984598.1 950730..951800(-) (xerS) [Streptococcus pyogenes strain BSAC_bs472 isolate Invasive disease]
MRRELLLEKIETYKAIMPWYVLDYYQSKLAVPYSFTTLYEYLKEYKRFFDWLMDADLTQAPKIADIDLSTLEHLTKKDLE
AFVLYLRERPSLNTYSTKEGLSQTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLASRAENIKQK
LFLGDETLAFLDYVDKEYEQKLSNRAKSSFRKNKERDLAIIALLLASGVRLSEAVNLDLKDVNLNMMIIEVIRKGGKRDS
VNVAGFAKGYLESYLAVRQRRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSEDFKIRVTPHKLRHTLATRLYDAT
KSQVLVSHQLGHSSTQVTDLYTHIVNDEQKNALDNL

Nucleotide

• Length: 1071 bp

>NTDB_id=420439 IB936_RS04770 WP_002984598.1 950730..951800(-) (xerS) [Streptococcus pyogenes strain BSAC_bs472 isolate Invasive disease]
ATGAGACGCGAATTATTACTAGAAAAAATTGAAACCTACAAGGCTATCATGCCTTGGTATGTTTTAGATTATTACCAATC
CAAATTAGCTGTTCCATACAGCTTTACCACCTTATATGAGTATTTAAAAGAATACAAACGCTTTTTTGATTGGCTGATGG
ATGCTGATTTAACGCAGGCGCCAAAGATTGCTGATATTGACTTGAGCACGCTTGAGCACCTTACCAAGAAGGATTTAGAG
GCCTTTGTGCTTTATTTGCGGGAACGACCTTCTCTCAACACCTATTCCACCAAAGAGGGGCTTTCTCAAACCACTATTAA
TCGGACCTTGTCTGCCCTATCAAGCCTTTACAAGTACTTGACTGAAGAGGTTGAAAATGACCAAGGAGAGCCTTATTTTT
ATCGGAATGTTATGAAAAAAGTGTCAACAAAAAAGAAAAAAGAAACCCTGGCTTCCAGAGCGGAAAATATTAAGCAGAAA
CTGTTTTTAGGTGATGAAACTCTAGCTTTCTTGGATTATGTGGATAAGGAATATGAGCAAAAATTGTCTAATCGTGCCAA
ATCTTCTTTCCGTAAAAATAAGGAGAGGGATTTGGCTATTATTGCTCTACTACTTGCTTCTGGTGTTCGTTTGTCTGAAG
CAGTGAATCTTGATTTAAAAGATGTCAATCTAAATATGATGATTATCGAAGTTATTCGCAAAGGCGGAAAACGTGATTCA
GTCAATGTAGCAGGTTTTGCGAAAGGTTATTTGGAGTCTTATCTAGCTGTTCGTCAGAGACGTTACAAGGCTGAAAAACA
GGATCTTGCTTTCTTTTTAACAGAATACCGTGGCGTTCCAAATCGAATGGATGCTTCTAGTATAGAAAAGATGGTTGGCA
AGTACTCTGAGGATTTTAAAATTCGTGTGACTCCTCACAAATTGCGTCATACGCTAGCGACAAGACTATATGATGCTACT
AAATCTCAGGTGTTAGTTAGTCATCAATTAGGCCATTCCTCTACTCAAGTCACGGATCTTTATACCCATATTGTCAATGA
TGAGCAAAAAAATGCTTTAGATAACCTTTAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (177-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: P0DH45

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	80.618	100	0.806