Detailed information    

insolico Bioinformatically predicted

Overview


Name   comK   Type   Regulator
Locus tag   M654_RS07515 Genome accession   NZ_CP048273
Coordinates   1459238..1459816 (+) Length   192 a.a.
NCBI ID   WP_026586304.1    Uniprot ID   A0A6I7EZ58
Organism   Bacillus sp. NSP9.1     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1454238..1464816
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M654_RS07495 (M654_007480) - 1454755..1456047 (-) 1293 WP_026586300.1 globin-coupled sensor protein -
  M654_RS07500 (M654_007485) - 1456141..1457670 (-) 1530 WP_026586301.1 FAD-dependent oxidoreductase -
  M654_RS07505 (M654_007490) - 1457805..1458662 (+) 858 WP_026586302.1 SDR family oxidoreductase -
  M654_RS07510 (M654_007495) - 1458728..1458961 (-) 234 WP_026586303.1 IDEAL domain-containing protein -
  M654_RS07515 (M654_007500) comK 1459238..1459816 (+) 579 WP_026586304.1 competence protein ComK Regulator
  M654_RS07520 (M654_007505) - 1459810..1460175 (-) 366 WP_026586305.1 hypothetical protein -
  M654_RS07525 (M654_007510) - 1460380..1460991 (+) 612 WP_035427984.1 TVP38/TMEM64 family protein -
  M654_RS07530 (M654_007515) lepB 1461004..1461519 (+) 516 WP_026586307.1 signal peptidase I -
  M654_RS07535 (M654_007520) - 1461573..1463345 (-) 1773 WP_026586308.1 S8 family peptidase -

Sequence


Protein


Download         Length: 192 a.a.        Molecular weight: 22405.62 Da        Isoelectric Point: 8.1267

>NTDB_id=420436 M654_RS07515 WP_026586304.1 1459238..1459816(+) (comK) [Bacillus sp. NSP9.1]
MSTEDMTMDSYEVNRSTMAVLPLGEGEIPASKVLETERTFRVNMRPFQIIERSCRYFGSSYAGRKAGTYEVIKVSHKPPI
MVDHSNNIFLFPTFSSTRPQCGWLSHAHVHEFCAAKYDNTCVTFVNGETLELPVSITSFENQVYRTAWLRTKFQDRIEGG
AMQKKQEFMLYPKEDRNQLIYEFILRELKKRY

Nucleotide


Download         Length: 579 bp        

>NTDB_id=420436 M654_RS07515 WP_026586304.1 1459238..1459816(+) (comK) [Bacillus sp. NSP9.1]
ATGAGCACAGAGGATATGACAATGGATTCGTATGAAGTAAACCGTTCGACAATGGCCGTTCTGCCTCTGGGAGAGGGGGA
AATACCCGCTTCAAAAGTACTTGAAACCGAAAGGACATTCAGGGTCAATATGAGACCTTTTCAAATCATAGAAAGAAGCT
GCCGTTATTTCGGCTCAAGCTATGCCGGAAGAAAAGCCGGCACGTATGAAGTGATTAAGGTTTCCCACAAGCCGCCGATC
ATGGTGGACCATTCAAACAACATTTTTCTTTTTCCCACATTCTCCTCAACGAGGCCTCAGTGCGGGTGGCTTTCCCATGC
ACATGTTCACGAATTTTGCGCGGCGAAATATGACAATACATGCGTCACGTTTGTGAACGGGGAAACGTTGGAGCTGCCCG
TGTCCATCACATCTTTCGAGAATCAGGTTTACCGAACGGCATGGCTGAGAACCAAATTTCAGGACAGGATTGAAGGCGGA
GCCATGCAGAAAAAGCAGGAATTTATGCTTTATCCGAAAGAAGACCGAAACCAGCTGATCTACGAGTTCATCCTCAGAGA
GCTGAAAAAGCGCTACTGA

Domains


Predicted by InterproScan.

(9-157)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6I7EZ58

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK Bacillus subtilis subsp. subtilis str. 168

68.254

98.438

0.672


Multiple sequence alignment