Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | SPPN_RS11095 | Genome accession | NC_015875 |
| Coordinates | 2145186..2147618 (-) | Length | 810 a.a. |
| NCBI ID | WP_001109674.1 | Uniprot ID | - |
| Organism | Streptococcus pseudopneumoniae IS7493 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2140186..2152618
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPPN_RS11075 (SPPN_11160) | - | 2141017..2141715 (-) | 699 | WP_000730915.1 | hypothetical protein | - |
| SPPN_RS14105 | - | 2142003..2142232 (+) | 230 | Protein_2205 | hypothetical protein | - |
| SPPN_RS11080 (SPPN_11165) | - | 2142306..2143076 (-) | 771 | WP_000132691.1 | NUDIX domain-containing protein | - |
| SPPN_RS11085 (SPPN_11170) | pnuC | 2143078..2143857 (-) | 780 | WP_000736870.1 | nicotinamide riboside transporter PnuC | - |
| SPPN_RS11090 (SPPN_11175) | - | 2143867..2144925 (-) | 1059 | WP_000730557.1 | AAA family ATPase | - |
| SPPN_RS11095 (SPPN_11185) | clpC | 2145186..2147618 (-) | 2433 | WP_001109674.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| SPPN_RS11100 (SPPN_11190) | - | 2147620..2148078 (-) | 459 | WP_001211273.1 | CtsR family transcriptional regulator | - |
| SPPN_RS11105 (SPPN_11195) | - | 2148197..2148925 (-) | 729 | WP_000136232.1 | ABC transporter ATP-binding protein | - |
| SPPN_RS11110 (SPPN_11200) | - | 2148925..2149932 (-) | 1008 | WP_014017376.1 | ABC transporter substrate-binding protein | - |
| SPPN_RS11115 (SPPN_11205) | - | 2149970..2150728 (-) | 759 | WP_162199268.1 | ABC transporter permease | - |
| SPPN_RS11120 (SPPN_11210) | - | 2150691..2150981 (-) | 291 | WP_000647658.1 | thiamine-binding protein | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90092.89 Da Isoelectric Point: 6.0371
>NTDB_id=42042 SPPN_RS11095 WP_001109674.1 2145186..2147618(-) (clpC) [Streptococcus pseudopneumoniae IS7493]
MNYSKALNECIESAYMVAGHFGARYLESWHLLIAMSNHSYSVAGATLNDYPYEMDRLEEVALELTETDYSQDETFTELPF
SRRLQILFDEAEYVASVVHAKVLGTEHVLYAILHDGNALATRILERAGFSYEDKKDQVKIAALRRNLEERAGWTREDLKA
LRQRHRTVADKQNSMANMMGMPQTPSGGLEDYTHDLTEQARSGKLEPVIGRDKEISRMIQILSRKTKNNPVLVGDAGVGK
TALALGLAQRIASGDVPAEMAKMRVLELDLMNVVAGTRFRGDFEERMNNIIKDIEEDGQVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVTIEEPSVADSMAILQGLKATYEKHHRVQITDEAVET
AVKMAHRYLTSRHLPDSAIDLLDEAAATVQNKAKHVKVDDSGLSPADKALMDGKWKQAAQLIAKEEQVPVYKDLVTESDI
LTTLSRLSGIPVQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSVSRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAK
ALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDD
GVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSS
DHMQEVVKIMVKPLVASLAEKGIDLKLQASALKLLANQGYDPEMGARPLRRTLQTEVEDKLAELLLKGDLVAGSTLKIGV
KAGQLKFDIA
MNYSKALNECIESAYMVAGHFGARYLESWHLLIAMSNHSYSVAGATLNDYPYEMDRLEEVALELTETDYSQDETFTELPF
SRRLQILFDEAEYVASVVHAKVLGTEHVLYAILHDGNALATRILERAGFSYEDKKDQVKIAALRRNLEERAGWTREDLKA
LRQRHRTVADKQNSMANMMGMPQTPSGGLEDYTHDLTEQARSGKLEPVIGRDKEISRMIQILSRKTKNNPVLVGDAGVGK
TALALGLAQRIASGDVPAEMAKMRVLELDLMNVVAGTRFRGDFEERMNNIIKDIEEDGQVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVTIEEPSVADSMAILQGLKATYEKHHRVQITDEAVET
AVKMAHRYLTSRHLPDSAIDLLDEAAATVQNKAKHVKVDDSGLSPADKALMDGKWKQAAQLIAKEEQVPVYKDLVTESDI
LTTLSRLSGIPVQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSVSRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAK
ALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDD
GVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSS
DHMQEVVKIMVKPLVASLAEKGIDLKLQASALKLLANQGYDPEMGARPLRRTLQTEVEDKLAELLLKGDLVAGSTLKIGV
KAGQLKFDIA
Nucleotide
Download Length: 2433 bp
>NTDB_id=42042 SPPN_RS11095 WP_001109674.1 2145186..2147618(-) (clpC) [Streptococcus pseudopneumoniae IS7493]
ATGAACTATTCAAAAGCATTGAATGAATGTATCGAAAGTGCCTACATGGTTGCTGGACATTTTGGAGCTCGTTATCTAGA
GTCTTGGCACTTGTTGATTGCCATGTCTAATCACAGTTATAGTGTAGCAGGGGCAACTTTAAATGATTATCCGTATGAGA
TGGACCGTTTAGAAGAGGTGGCTTTGGAACTGACTGAAACGGACTATAGCCAGGATGAAACTTTTACGGAATTGCCGTTC
TCCCGTCGTTTGCAGATTCTTTTTGACGAAGCAGAGTATGTAGCTTCAGTGGTCCATGCTAAGGTGCTAGGGACAGAGCA
CGTCCTCTATGCGATTTTGCATGATGGCAATGCCTTGGCGACTCGTATTTTGGAGAGGGCTGGTTTTTCTTATGAAGACA
AGAAAGATCAGGTCAAGATTGCTGCTCTTCGTCGAAATTTAGAAGAACGGGCAGGTTGGACTCGTGAAGACCTCAAGGCT
TTACGTCAACGCCATCGTACTGTGGCTGACAAACAAAATTCTATGGCCAATATGATGGGCATGCCGCAGACTCCGAGTGG
TGGTCTCGAGGACTATACGCATGATTTGACAGAGCAAGCGCGTTCTGGCAAGTTAGAACCAGTCATCGGTCGGGATAAGG
AAATCTCGCGTATGATTCAAATCTTGAGCCGTAAGACTAAGAACAACCCTGTCTTGGTCGGGGATGCTGGTGTCGGGAAA
ACAGCTCTGGCGCTTGGTCTTGCCCAGCGTATTGCTAGTGGTGATGTACCTGCGGAAATGGCTAAGATGCGCGTGTTGGA
GCTTGATTTGATGAATGTCGTTGCAGGTACACGTTTCCGTGGTGACTTTGAAGAGCGTATGAATAATATCATCAAGGATA
TTGAGGAAGATGGCCAAGTAATTCTCTTTATCGATGAACTCCACACTATCATGGGTTCTGGTAGCGGGATTGACTCGACT
CTGGATGCGGCCAATATTTTGAAGCCAGCCTTGGCGCGTGGAACTTTGAGAACGGTTGGTGCCACCACTCAGGAAGAATA
CCAAAAACACATCGAAAAAGATGCGGCCCTTTCTCGTCGATTCGCTAAAGTGACGATTGAAGAGCCAAGTGTGGCAGACA
GCATGGCCATTTTGCAAGGCTTGAAGGCGACTTATGAGAAACATCACCGTGTGCAAATCACAGATGAAGCGGTCGAAACA
GCCGTTAAGATGGCCCATCGTTACTTGACTAGTCGCCATTTGCCAGACTCTGCTATAGACCTCTTAGATGAAGCAGCAGC
AACAGTGCAAAATAAGGCTAAGCATGTAAAAGTAGACGATTCAGGCTTGAGTCCAGCTGACAAGGCCTTGATGGATGGCA
AGTGGAAACAGGCAGCTCAGCTAATCGCAAAAGAAGAGCAAGTGCCTGTCTATAAAGACTTGGTAACAGAGTCTGATATT
TTGACTACCTTGAGTCGATTGTCAGGTATCCCAGTCCAAAAACTGACTCAGACTGACGCTAAGAAATACCTGAACTTGGA
AGCTGAACTACACAAGCGTGTCATCGGTCAAGATCAAGCAGTTTCAAGCGTTAGCCGTGCTATTCGCCGCAATCAGTCAG
GGATTCGCAGTCACAAGCGTCCGATTGGTTCTTTTATGTTCCTAGGACCCACAGGTGTCGGGAAGACCGAATTGGCCAAG
GCTTTGGCAGAAGTTCTCTTTGATGACGAATCAGCCCTTATCCGCTTTGATATGAGTGAGTATATGGAGAAATTTGCAGC
CAGCCGTCTCAATGGAGCTCCTCCGGGTTATGTGGGTTATGAAGAAGGTGGGGAGTTGACCGAGAAGGTTCGCAACAAAC
CCTATTCCGTTCTCCTTTTTGACGAGGTAGAGAAGGCCCACCCAGATATCTTTAATGTGCTCTTGCAGGTCTTGGATGAT
GGTGTCTTGACCGATAGCAAGGGCCGCAAGGTTGACTTTTCAAATACCATTATCATCATGACGTCAAACCTTGGTGCGAC
AGCCCTTCGGGATGACAAGACCGTCGGTTTTGGAGCTAAGGATATTCGTTTTGACCAGGAAAATATGGAAAAACGCATGT
TTGAAGAGCTGAAAAAGGCTTATAGACCTGAGTTTATCAACCGTATTGATGAAAAGGTGGTCTTCCATAGCCTGTCTAGT
GACCATATGCAGGAAGTGGTGAAGATTATGGTCAAACCTTTAGTGGCAAGTTTGGCTGAAAAAGGCATTGACTTGAAATT
ACAAGCTTCCGCACTGAAATTGTTGGCAAATCAAGGATATGACCCAGAGATGGGAGCTCGTCCACTTCGCAGAACCCTGC
AAACAGAAGTGGAAGACAAGTTGGCAGAACTTCTTCTTAAGGGAGATTTGGTGGCAGGCAGCACACTTAAGATTGGTGTC
AAAGCAGGCCAGTTAAAATTTGATATTGCATAA
ATGAACTATTCAAAAGCATTGAATGAATGTATCGAAAGTGCCTACATGGTTGCTGGACATTTTGGAGCTCGTTATCTAGA
GTCTTGGCACTTGTTGATTGCCATGTCTAATCACAGTTATAGTGTAGCAGGGGCAACTTTAAATGATTATCCGTATGAGA
TGGACCGTTTAGAAGAGGTGGCTTTGGAACTGACTGAAACGGACTATAGCCAGGATGAAACTTTTACGGAATTGCCGTTC
TCCCGTCGTTTGCAGATTCTTTTTGACGAAGCAGAGTATGTAGCTTCAGTGGTCCATGCTAAGGTGCTAGGGACAGAGCA
CGTCCTCTATGCGATTTTGCATGATGGCAATGCCTTGGCGACTCGTATTTTGGAGAGGGCTGGTTTTTCTTATGAAGACA
AGAAAGATCAGGTCAAGATTGCTGCTCTTCGTCGAAATTTAGAAGAACGGGCAGGTTGGACTCGTGAAGACCTCAAGGCT
TTACGTCAACGCCATCGTACTGTGGCTGACAAACAAAATTCTATGGCCAATATGATGGGCATGCCGCAGACTCCGAGTGG
TGGTCTCGAGGACTATACGCATGATTTGACAGAGCAAGCGCGTTCTGGCAAGTTAGAACCAGTCATCGGTCGGGATAAGG
AAATCTCGCGTATGATTCAAATCTTGAGCCGTAAGACTAAGAACAACCCTGTCTTGGTCGGGGATGCTGGTGTCGGGAAA
ACAGCTCTGGCGCTTGGTCTTGCCCAGCGTATTGCTAGTGGTGATGTACCTGCGGAAATGGCTAAGATGCGCGTGTTGGA
GCTTGATTTGATGAATGTCGTTGCAGGTACACGTTTCCGTGGTGACTTTGAAGAGCGTATGAATAATATCATCAAGGATA
TTGAGGAAGATGGCCAAGTAATTCTCTTTATCGATGAACTCCACACTATCATGGGTTCTGGTAGCGGGATTGACTCGACT
CTGGATGCGGCCAATATTTTGAAGCCAGCCTTGGCGCGTGGAACTTTGAGAACGGTTGGTGCCACCACTCAGGAAGAATA
CCAAAAACACATCGAAAAAGATGCGGCCCTTTCTCGTCGATTCGCTAAAGTGACGATTGAAGAGCCAAGTGTGGCAGACA
GCATGGCCATTTTGCAAGGCTTGAAGGCGACTTATGAGAAACATCACCGTGTGCAAATCACAGATGAAGCGGTCGAAACA
GCCGTTAAGATGGCCCATCGTTACTTGACTAGTCGCCATTTGCCAGACTCTGCTATAGACCTCTTAGATGAAGCAGCAGC
AACAGTGCAAAATAAGGCTAAGCATGTAAAAGTAGACGATTCAGGCTTGAGTCCAGCTGACAAGGCCTTGATGGATGGCA
AGTGGAAACAGGCAGCTCAGCTAATCGCAAAAGAAGAGCAAGTGCCTGTCTATAAAGACTTGGTAACAGAGTCTGATATT
TTGACTACCTTGAGTCGATTGTCAGGTATCCCAGTCCAAAAACTGACTCAGACTGACGCTAAGAAATACCTGAACTTGGA
AGCTGAACTACACAAGCGTGTCATCGGTCAAGATCAAGCAGTTTCAAGCGTTAGCCGTGCTATTCGCCGCAATCAGTCAG
GGATTCGCAGTCACAAGCGTCCGATTGGTTCTTTTATGTTCCTAGGACCCACAGGTGTCGGGAAGACCGAATTGGCCAAG
GCTTTGGCAGAAGTTCTCTTTGATGACGAATCAGCCCTTATCCGCTTTGATATGAGTGAGTATATGGAGAAATTTGCAGC
CAGCCGTCTCAATGGAGCTCCTCCGGGTTATGTGGGTTATGAAGAAGGTGGGGAGTTGACCGAGAAGGTTCGCAACAAAC
CCTATTCCGTTCTCCTTTTTGACGAGGTAGAGAAGGCCCACCCAGATATCTTTAATGTGCTCTTGCAGGTCTTGGATGAT
GGTGTCTTGACCGATAGCAAGGGCCGCAAGGTTGACTTTTCAAATACCATTATCATCATGACGTCAAACCTTGGTGCGAC
AGCCCTTCGGGATGACAAGACCGTCGGTTTTGGAGCTAAGGATATTCGTTTTGACCAGGAAAATATGGAAAAACGCATGT
TTGAAGAGCTGAAAAAGGCTTATAGACCTGAGTTTATCAACCGTATTGATGAAAAGGTGGTCTTCCATAGCCTGTCTAGT
GACCATATGCAGGAAGTGGTGAAGATTATGGTCAAACCTTTAGTGGCAAGTTTGGCTGAAAAAGGCATTGACTTGAAATT
ACAAGCTTCCGCACTGAAATTGTTGGCAAATCAAGGATATGACCCAGAGATGGGAGCTCGTCCACTTCGCAGAACCCTGC
AAACAGAAGTGGAAGACAAGTTGGCAGAACTTCTTCTTAAGGGAGATTTGGTGGCAGGCAGCACACTTAAGATTGGTGTC
AAAGCAGGCCAGTTAAAATTTGATATTGCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae Rx1 |
99.259 |
100 |
0.993 |
| clpC | Streptococcus pneumoniae D39 |
99.259 |
100 |
0.993 |
| clpC | Streptococcus pneumoniae TIGR4 |
99.012 |
100 |
0.99 |
| clpC | Streptococcus mutans UA159 |
66.79 |
100 |
0.67 |
| clpC | Streptococcus thermophilus LMD-9 |
66.093 |
100 |
0.664 |
| clpC | Streptococcus thermophilus LMG 18311 |
65.971 |
100 |
0.663 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.975 |
100 |
0.501 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
45.735 |
99.877 |
0.457 |
| clpE | Streptococcus mutans UA159 |
48.475 |
76.914 |
0.373 |
| clpE | Streptococcus pneumoniae Rx1 |
46.593 |
77.901 |
0.363 |
| clpE | Streptococcus pneumoniae D39 |
46.593 |
77.901 |
0.363 |
| clpE | Streptococcus pneumoniae R6 |
46.593 |
77.901 |
0.363 |
| clpE | Streptococcus pneumoniae TIGR4 |
46.593 |
77.901 |
0.363 |