Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA/celA/cilE   Type   Machinery gene
Locus tag   IB937_RS03485 Genome accession   NZ_CP061132
Coordinates   678493..679155 (+) Length   220 a.a.
NCBI ID   WP_002995626.1    Uniprot ID   A0A0H2UV22
Organism   Streptococcus pyogenes strain BSAC_bs1388 isolate Invasive disease     
Function   dsDNA binding to the cell surface (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 673493..684155
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IB937_RS03465 (IB937_03465) - 674366..676367 (+) 2002 Protein_625 KUP/HAK/KT family potassium transporter -
  IB937_RS03470 (IB937_03470) - 676391..676669 (-) 279 WP_002989164.1 GIY-YIG nuclease family protein -
  IB937_RS03475 (IB937_03475) - 676659..677435 (-) 777 WP_010922438.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  IB937_RS03480 (IB937_03480) - 677553..678293 (+) 741 WP_021299345.1 lysophospholipid acyltransferase family protein -
  IB937_RS03485 (IB937_03485) comEA/celA/cilE 678493..679155 (+) 663 WP_002995626.1 ComEA family DNA-binding protein Machinery gene
  IB937_RS03490 (IB937_03490) comEC/celB 679136..681379 (+) 2244 WP_011528768.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  IB937_RS03495 (IB937_03495) holA 681450..682490 (+) 1041 WP_011017949.1 DNA polymerase III subunit delta -
  IB937_RS03500 (IB937_03500) sodA 682587..683192 (+) 606 WP_002983977.1 superoxide dismutase SodA -
  IB937_RS03505 (IB937_03505) - 683359..683505 (+) 147 WP_011528767.1 hypothetical protein -

Sequence

Protein


Download         Length: 220 a.a.        Molecular weight: 24623.45 Da        Isoelectric Point: 6.7451

>NTDB_id=420344 IB937_RS03485 WP_002995626.1 678493..679155(+) (comEA/celA/cilE) [Streptococcus pyogenes strain BSAC_bs1388 isolate Invasive disease]
MLDELLIKGKSFLRERYFLPYLISLLLGLFLILSFSFLFWGNRQSKAAVPALREISPVKQQVSEEKKEIQEDNSILVDLK
GAVQKEGVYKLTASSRVRDVIELAGGLTSEADKHAINFAEKLTDEQVVYVPKQGEEISVLPRSLVSGKKETASKDQSKVH
INKASLEELQHIPGIGAKRAQDIIDMRDKLGGFKALEDLRQVSGIGEKTLEKLKDDIFLD

Nucleotide


Download         Length: 663 bp        

>NTDB_id=420344 IB937_RS03485 WP_002995626.1 678493..679155(+) (comEA/celA/cilE) [Streptococcus pyogenes strain BSAC_bs1388 isolate Invasive disease]
ATGTTAGACGAATTATTAATTAAAGGAAAATCGTTTTTGAGAGAGCGGTATTTTCTGCCATACCTAATTAGTCTTTTATT
AGGACTTTTTCTAATACTAAGCTTCAGTTTTTTGTTCTGGGGAAATAGGCAGAGCAAGGCAGCCGTTCCTGCTTTGAGAG
AAATATCGCCTGTGAAACAGCAGGTTAGTGAAGAAAAAAAGGAAATTCAAGAAGATAACAGTATTTTAGTGGATTTAAAA
GGCGCCGTACAAAAAGAGGGAGTTTATAAGCTAACTGCTAGCAGTCGTGTGCGAGATGTCATTGAACTAGCTGGAGGCCT
AACTTCAGAAGCTGATAAACATGCTATTAATTTTGCAGAAAAACTAACTGATGAGCAAGTTGTTTATGTACCTAAACAAG
GAGAAGAGATTTCTGTGCTACCAAGATCATTAGTTTCTGGTAAAAAAGAAACTGCCAGCAAGGATCAGTCAAAGGTTCAT
ATTAATAAGGCCAGCTTAGAAGAACTACAACATATCCCAGGTATTGGTGCTAAAAGAGCTCAGGATATTATTGATATGAG
AGATAAGTTAGGTGGTTTTAAAGCGTTAGAAGATCTCCGTCAGGTTTCGGGGATTGGCGAAAAAACGCTCGAGAAATTAA
AAGATGACATTTTCTTGGACTAA

Domains

Predicted by InterProScan.

SLBB domain (SLBB)

(77-130)

Helix-hairpin-helix motif (HHH_3)

(156-217)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UV22

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA/celA/cilE Streptococcus pneumoniae TIGR4

42.995

94.091

0.405

Multiple sequence alignment