Detailed information NTG0420258

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: GYN04_RS10735
• Genome accession: NZ_CP048254
• Coordinates: 2051667..2052920 (+)
• Length: 417 a.a.
• NCBI ID: WP_003696286.1
• Uniprot ID: A0AB74ETB0
• Organism: Neisseria gonorrhoeae strain CT530
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2046667..2057920

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GYN04_RS10715 (GYN04_10450)	-	2047417..2048418 (+)	1002	WP_003691948.1	thiamine ABC transporter substrate-binding protein	-
GYN04_RS10720 (GYN04_10455)	-	2048512..2049360 (+)	849	WP_003687000.1	mechanosensitive ion channel family protein	-
GYN04_RS10725 (GYN04_10460)	-	2049387..2049869 (+)	483	WP_003694396.1	CinA family protein	-
GYN04_RS10730 (GYN04_10465)	msrAB	2049953..2051521 (-)	1569	WP_003694393.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
GYN04_RS10735 (GYN04_10470)	pilA	2051667..2052920 (+)	1254	WP_003696286.1	signal recognition particle-docking protein FtsY	Machinery gene
GYN04_RS10740 (GYN04_10475)	-	2053189..2053953 (-)	765	Protein_2081	opacity family porin	-
GYN04_RS10745 (GYN04_10480)	-	2054556..2054912 (-)	357	Protein_2082	pilin	-
GYN04_RS10750 (GYN04_10485)	-	2054878..2055330 (-)	453	Protein_2083	pilin	-
GYN04_RS10755 (GYN04_10490)	lpxC	2055459..2056382 (-)	924	WP_003687007.1	UDP-3-O-acyl-N-acetylglucosamine deacetylase	-
GYN04_RS10765	-	2057096..2057461 (-)	366	Protein_2085	pilin	-
GYN04_RS10770	-	2057427..2057831 (-)	405	Protein_2086	pilin	-

Sequence

Protein

• Length: 417 a.a.
• Molecular weight: 44331.70 Da
• Isoelectric Point: 4.8647

>NTDB_id=420258 GYN04_RS10735 WP_003696286.1 2051667..2052920(+) (pilA) [Neisseria gonorrhoeae strain CT530]
MFSFFRRKKKQETPALEEAQVQETAAKVESEVAQIVGNIKEDVESLAESVKGRAESAVETVSGAVEQVKETVAEMPSEAG
EAAERVESAKEAVAETVGEAVGQVQEAVATTEEHKLGWAARLKQGLAKSRDKMAKSLAGVFGGGQIGEDLYEELETVLIT
GDMGMEATEYLMKDVRGRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKY
FQAQGKSVLLAAGDTFRAAAREQLQAWGGRNNVTVISQTTGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEI
KKVKRVLQKAIPGAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGI
DDLRPFDARAFVDALLD

Nucleotide

• Length: 1254 bp

>NTDB_id=420258 GYN04_RS10735 WP_003696286.1 2051667..2052920(+) (pilA) [Neisseria gonorrhoeae strain CT530]
ATGTTCAGCTTCTTCCGTCGCAAGAAAAAACAGGAAACGCCGGCTCTCGAGGAGGCCCAAGTTCAGGAAACCGCAGCAAA
AGTAGAATCTGAAGTTGCTCAAATAGTTGGAAATATTAAAGAAGATGTCGAATCTTTAGCAGAAAGCGTCAAAGGGCGGG
CCGAATCTGCCGTTGAAACCGTCAGCGGTGCGGTTGAACAGGTAAAGGAAACCGTTGCCGAGATGCCGTCTGAAGCAGGG
GAAGCGGCGGAACGCGTTGAATCCGCAAAAGAAGCTGTTGCCGAAACCGTCGGCGAGGCTGTCGGGCAAGTTCAAGAAGC
CGTTGCGACAACTGAAGAACACAAGCTCGGTTGGGCTGCGCGTTTGAAACAAGGCTTGGCCAAATCACGCGACAAAATGG
CGAAATCGCTGGCCGGCGTGTTCGGCGGCGGACAAATCGGCGAGGATTTGTACGAAGAGCTGGAAACCGTGCTGATTACC
GGCGATATGGGCATGGAGGCCACCGAATACCTGATGAAAGACGTGCGCGGCCGCGTCAGCCTCAAAGGGCTGAAAGACGG
CAACGAATTGCGCGGCGCGTTGAAAGAAGCCTTGTACGACCTGATTAAGCCGTTGGAAAAACCGCTGGTCTTGCCCGAAA
CTAAAGAGCCTTTCGTGATTATGCTTGCCGGTATCAACGGCGCGGGCAAAACCACCTCTATCGGCAAACTCGCCAAATAT
TTCCAAGCGCAGGGCAAATCCGTATTGCTGGCGGCGGGCGATACCTTCCGCGCCGCCGCCCGTGAGCAGCTTCAGGCTTG
GGGCGGGCGCAACAATGTGACCGTAATTTCGCAAACCACGGGCGATTCCGCCGCCGTGTGCTTCGATGCCGTCCAAGCCG
CCAAAGCGCGCGGGATCGACATCGTGCTTGCCGACACCGCCGGCCGCCTGCCCACGCAGCTTCATTTGATGGAAGAAATC
AAAAAAGTGAAGCGCGTGCTGCAAAAAGCCATTCCCGGCGCGCCGCACGAAATTATCGTCGTACTCGATGCCAATATCGG
GCAAAACGCCGTCAACCAAGTCAAAGCCTTTGACGACGCATTGGGGCTGACGGGGCTTATCGTTACCAAACTCGACGGCA
CGGCAAAAGGCGGCATCCTCGCCGCGCTTGCTTCCGACCGCCCCGTCCCCGTCCGCTACATCGGCGTGGGCGAAGGCATA
GACGACCTGCGCCCGTTTGACGCGCGCGCGTTTGTGGACGCACTGCTGGATTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (217-416)

• SRP54-type protein, helical bundle domain (SRP54_N) (132-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	100	100	1