Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   KPZ59_RS01025 Genome accession   NZ_CP048131
Coordinates   215359..216513 (-) Length   384 a.a.
NCBI ID   WP_000755280.1    Uniprot ID   A0A009S0N9
Organism   Acinetobacter baumannii strain D46     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 210359..221513
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KPZ59_RS01005 (KPZ59_00200) - 211520..212170 (+) 651 WP_012300783.1 TetR/AcrR family transcriptional regulator -
  KPZ59_RS01010 (KPZ59_00201) - 212276..213196 (+) 921 WP_000084546.1 DMT family transporter -
  KPZ59_RS01015 (KPZ59_00202) - 213588..214157 (-) 570 WP_000633612.1 L-threonylcarbamoyladenylate synthase -
  KPZ59_RS01020 (KPZ59_00203) dprA 214208..215338 (-) 1131 WP_002009557.1 DNA-processing protein DprA Machinery gene
  KPZ59_RS01025 (KPZ59_00204) tsaP 215359..216513 (-) 1155 WP_000755280.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  KPZ59_RS01030 (KPZ59_00205) def 216636..217166 (+) 531 WP_001196539.1 peptide deformylase -
  KPZ59_RS01035 - 217203..217631 (+) 429 WP_000231981.1 DUF2946 family protein -
  KPZ59_RS01040 (KPZ59_00207) - 217704..219785 (+) 2082 WP_001120682.1 TonB-dependent copper receptor -
  KPZ59_RS01045 (KPZ59_00208) - 219835..220041 (+) 207 WP_000182542.1 hypothetical protein -
  KPZ59_RS01050 (KPZ59_00209) - 220111..221325 (-) 1215 WP_001177956.1 oxygenase MpaB family protein -

Sequence


Protein


Download         Length: 384 a.a.        Molecular weight: 42334.28 Da        Isoelectric Point: 8.5909

>NTDB_id=419980 KPZ59_RS01025 WP_000755280.1 215359..216513(-) (tsaP) [Acinetobacter baumannii strain D46]
MKKVFNGMVNFHALGIKKHLLALALCTGVAIGTIAEVHATSPNHNPPSLKSNAPNVYVVKRGDTLWDISGHFLNKPWRWP
EIWASNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCVGIIRRYTGQTTNLQPQVRVEALNNSVPVIPLEHIKQWLE
NSTILPADSITNTPYIVGTADQRVLAGKGQTIYARGQGLINGQRYAVYREGEPYYFTDNKGKKHSLGIELLQVASGVAVS
SEKDITTLELTDSYNAEVRRGDRVMPEEQATLPTLFYPVDAKQVTDGGKIIRVMGSIGRAAKNSVVTLDRGTTQGIQVGQ
VFDITQQGESIRDPKTKEVIQLPGQQIGSLMVFRTFDQLSYAFVLESDLPIKVGSSIQPPQFND

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=419980 KPZ59_RS01025 WP_000755280.1 215359..216513(-) (tsaP) [Acinetobacter baumannii strain D46]
ATGAAAAAGGTTTTTAACGGCATGGTTAATTTTCATGCCTTGGGGATAAAGAAGCATTTACTTGCCTTGGCGCTCTGTAC
AGGTGTCGCAATCGGTACGATAGCAGAGGTTCATGCAACCAGTCCGAACCATAATCCACCCTCACTTAAAAGTAATGCAC
CCAATGTATATGTTGTAAAACGTGGGGATACTTTATGGGATATTTCAGGACATTTTCTAAATAAACCATGGCGTTGGCCT
GAAATCTGGGCGAGCAACCAACATGTTAAAAATCCACACTGGATCTATCCGGGTGACCGATTACTATTATGTAGCCTAGA
TGGGCGTCCTTTAGTCGGTAAAGATGAGGGCGATGGTTGTGTCGGTATTATTCGCCGCTATACAGGTCAAACCACAAACC
TACAACCACAAGTTCGCGTCGAAGCATTAAATAATAGCGTTCCAGTTATTCCACTTGAACATATTAAACAGTGGTTAGAG
AACAGTACTATTTTACCAGCCGATTCAATTACCAACACACCTTATATTGTTGGTACCGCCGATCAACGTGTACTTGCAGG
AAAAGGCCAGACTATTTATGCACGAGGACAAGGCTTAATTAATGGGCAGCGTTATGCAGTCTACCGAGAAGGTGAACCTT
ACTATTTCACAGACAATAAAGGTAAAAAGCATAGTTTAGGGATTGAACTACTACAGGTTGCTTCAGGTGTTGCGGTATCT
TCTGAAAAAGATATTACTACATTAGAACTAACAGATAGTTATAACGCTGAAGTACGTCGTGGCGATCGTGTTATGCCTGA
AGAACAAGCTACTTTGCCAACATTATTTTACCCAGTAGATGCGAAGCAAGTGACGGATGGTGGCAAGATTATTCGTGTCA
TGGGCTCAATTGGTAGAGCTGCAAAAAATAGTGTAGTGACTTTGGATCGCGGTACAACTCAGGGCATTCAAGTAGGTCAA
GTTTTTGATATTACTCAACAAGGTGAATCAATTCGCGACCCTAAAACCAAAGAAGTGATTCAACTTCCTGGCCAACAAAT
TGGCAGTCTAATGGTTTTTAGAACTTTTGATCAGCTAAGTTATGCTTTTGTTTTAGAGAGCGATTTACCAATTAAGGTTG
GTTCAAGCATTCAGCCACCTCAATTTAATGATTAA

Domains


Predicted by InterproScan.

(57-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A009S0N9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

99.219

100

0.992


Multiple sequence alignment