Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   M662_RS06395 Genome accession   NZ_CP048117
Coordinates   1230323..1231276 (+) Length   317 a.a.
NCBI ID   WP_026578409.1    Uniprot ID   A0A7Z2SVI8
Organism   Bacillus sp. SB49     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1225323..1236276
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M662_RS06375 (M662_06370) leuC 1226239..1227651 (+) 1413 WP_026578407.1 3-isopropylmalate dehydratase large subunit -
  M662_RS06380 (M662_06375) leuD 1227656..1228261 (+) 606 WP_008636491.1 3-isopropylmalate dehydratase small subunit -
  M662_RS06385 (M662_06380) ilvA 1228276..1229235 (+) 960 WP_035388525.1 threonine ammonia-lyase -
  M662_RS06390 (M662_06385) - 1229341..1230144 (-) 804 WP_026578408.1 alpha/beta hydrolase -
  M662_RS06395 (M662_06390) ceuB 1230323..1231276 (+) 954 WP_026578409.1 ABC transporter permease Machinery gene
  M662_RS06400 (M662_06395) - 1231266..1232213 (+) 948 WP_026578410.1 iron chelate uptake ABC transporter family permease subunit -
  M662_RS06405 (M662_06400) - 1232210..1232965 (+) 756 WP_026578411.1 ABC transporter ATP-binding protein -
  M662_RS06410 (M662_06405) - 1232981..1233937 (+) 957 WP_026578412.1 siderophore ABC transporter substrate-binding protein -
  M662_RS06415 (M662_06410) - 1234022..1234843 (+) 822 WP_026578413.1 MerR family transcriptional regulator -
  M662_RS06420 (M662_06415) - 1234882..1235082 (-) 201 WP_026578414.1 hypothetical protein -
  M662_RS06425 (M662_06420) - 1235229..1235651 (+) 423 WP_008636481.1 DUF1801 domain-containing protein -
  M662_RS06430 (M662_06425) - 1235773..1236036 (+) 264 WP_008636480.1 hypothetical protein -

Sequence


Protein


Download         Length: 317 a.a.        Molecular weight: 34945.07 Da        Isoelectric Point: 9.8031

>NTDB_id=419952 M662_RS06395 WP_026578409.1 1230323..1231276(+) (ceuB) [Bacillus sp. SB49]
MKRRYLFILLAVLSWLSLVIGVSDLPMLQVHTWDESQWKVFWVSRFPRLVSILIAGMSMAIGGLIMQQLSRNKFVSPTTA
GTIDSARLGIVVALLLFSSASPLIQTLIAFLFALAGTMLFMKILDGIKLKDAILIPLVGIMLGNVIGSITTFFAYQYDLI
QSIGSWLQGDFSMILKGDYELLYLSIPLVILAYLFAHRFTIAGMGEDFSKNLGMNHKQVVYIGLFIVALMTSVVVLTVGS
IPFLGLIVPNIVSIYRGDHLKNSISHTALLGALFVLVCDIIGRIIIYPYEIPIGVTVGVIGSGLFLYLLFRRKAYAA

Nucleotide


Download         Length: 954 bp        

>NTDB_id=419952 M662_RS06395 WP_026578409.1 1230323..1231276(+) (ceuB) [Bacillus sp. SB49]
ATGAAGCGTAGGTATTTATTCATTCTTTTAGCGGTACTGTCTTGGTTATCGCTCGTCATCGGTGTTTCGGATCTGCCGAT
GCTCCAAGTACATACATGGGATGAATCGCAGTGGAAGGTATTCTGGGTGAGCAGATTCCCGCGGCTCGTCAGTATCCTTA
TCGCCGGCATGAGCATGGCGATCGGCGGATTGATCATGCAGCAGCTGAGCAGGAACAAGTTCGTATCCCCGACGACTGCC
GGAACGATCGATTCCGCACGGCTCGGAATCGTTGTGGCGCTTCTTTTGTTCTCATCAGCGAGCCCGTTAATCCAGACGTT
GATTGCGTTTCTCTTCGCATTGGCGGGGACGATGTTGTTTATGAAGATTCTCGATGGAATCAAGCTGAAGGACGCAATCC
TCATTCCGCTTGTCGGGATCATGCTTGGGAATGTCATCGGTTCGATCACGACATTCTTCGCCTATCAGTATGATTTGATC
CAGAGCATCGGATCATGGCTTCAGGGCGATTTCTCAATGATTTTGAAGGGGGACTATGAGCTGCTTTATCTCAGTATCCC
GCTTGTCATTCTCGCATATCTCTTTGCGCATCGATTCACGATCGCGGGAATGGGCGAAGATTTCTCGAAGAATCTCGGGA
TGAACCATAAGCAGGTCGTCTACATAGGTTTGTTCATCGTCGCACTGATGACTTCGGTCGTTGTCCTGACGGTGGGATCG
ATTCCTTTTCTTGGCTTAATCGTCCCGAACATCGTCTCAATCTACAGGGGAGACCATTTAAAGAACAGTATCAGCCATAC
GGCGCTGCTTGGTGCATTATTTGTCCTCGTCTGTGACATTATTGGAAGAATCATTATTTATCCGTATGAAATCCCGATCG
GCGTGACGGTCGGAGTCATCGGAAGCGGTCTGTTCCTTTATTTATTGTTTAGGAGAAAAGCGTATGCGGCATAA

Domains


Predicted by InterproScan.

(9-311)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7Z2SVI8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

50.799

98.738

0.502


Multiple sequence alignment