Detailed information NTG0419922

Bioinformatically predicted

Overview

• Name: comC
• Type: Machinery gene
• Locus tag: GSF71_RS04515
• Genome accession: NZ_CP048116
• Coordinates: 901029..901718 (+)
• Length: 229 a.a.
• NCBI ID: WP_076645336.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain MBEL1397
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 896029..906718

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GSF71_RS04495	-	896471..897022 (+)	552	WP_061827366.1	cysteine hydrolase family protein	-
GSF71_RS04500	fusA	897592..899679 (-)	2088	WP_016265721.1	elongation factor G	-
GSF71_RS04505	rpsG	899775..900245 (-)	471	WP_004270185.1	30S ribosomal protein S7	-
GSF71_RS04510	rpsL	900335..900748 (-)	414	WP_004270179.1	30S ribosomal protein S12	-
GSF71_RS04515	comC	901029..901718 (+)	690	WP_076645336.1	prepilin peptidase	Machinery gene
GSF71_RS04520	-	901722..902294 (-)	573	WP_061827365.1	isochorismatase family protein	-
GSF71_RS04525	rpoC	902468..906112 (-)	3645	WP_035147345.1	DNA-directed RNA polymerase subunit beta'	-

Sequence

Protein

• Length: 229 a.a.
• Molecular weight: 26190.50 Da
• Isoelectric Point: 7.2085

>NTDB_id=419922 GSF71_RS04515 WP_076645336.1 901029..901718(+) (comC) [Latilactobacillus sakei strain MBEL1397]
MLLYLIIFYSGACCASFLTVCAWRLPIEKSIITPRSHCDCCQQPLAWHDLLPLFSYLYLHGHCRTCHAQIKPTFLFSELI
GGLLACFIFSESLSWDLAYLLVILFYISLVDLFYYILYPIPLFASLVPLFYLYWPQNHWLGATIFCCGLLLTTYWASGFG
FGDVELLTILTLWVGLEPVLRILLAACLICILFQGIKKIWPSPKQATRQIPFIPYISMGVVILLLQTPQ

Nucleotide

• Length: 690 bp

>NTDB_id=419922 GSF71_RS04515 WP_076645336.1 901029..901718(+) (comC) [Latilactobacillus sakei strain MBEL1397]
ATGTTACTTTATTTAATCATCTTTTATAGCGGTGCTTGTTGCGCCTCATTTCTAACCGTTTGCGCCTGGCGCTTACCCAT
CGAAAAGTCCATTATCACACCACGTTCGCACTGCGATTGCTGTCAGCAACCACTGGCTTGGCATGATTTATTACCACTAT
TCAGCTACCTATACTTACATGGCCACTGCCGCACTTGTCATGCTCAGATTAAGCCCACTTTTTTATTCAGCGAACTAATT
GGTGGTCTATTGGCCTGCTTCATTTTTAGCGAATCCCTTTCTTGGGACCTCGCTTATTTACTCGTGATTCTTTTTTACAT
CAGTCTCGTTGACCTCTTCTACTATATTCTCTATCCAATCCCCTTATTCGCATCACTGGTGCCCCTCTTTTATTTGTATT
GGCCACAGAATCATTGGCTAGGAGCCACCATCTTTTGCTGCGGGCTGTTGCTCACCACTTACTGGGCGTCTGGTTTTGGC
TTTGGCGATGTCGAGTTACTCACTATCCTAACGTTGTGGGTGGGCCTTGAACCCGTTTTGCGAATTCTCTTGGCGGCCTG
TCTAATTTGCATTCTATTTCAAGGCATCAAAAAAATCTGGCCATCGCCTAAACAAGCGACGCGCCAGATTCCGTTTATCC
CCTATATATCGATGGGTGTGGTAATTCTACTTCTACAAACACCGCAGTAA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (11-89)

• Type IV leader peptidase family (Peptidase_A24) (99-193)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comC	Latilactobacillus sakei subsp. sakei 23K	97.38	100	0.974