Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   IBL27_RS10110 Genome accession   NZ_CP061071
Coordinates   1890580..1890783 (+) Length   67 a.a.
NCBI ID   WP_370464372.1    Uniprot ID   -
Organism   Streptococcus mutans B04Sm5     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1885580..1895783
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IBL27_RS09235 (IBL27_09235) - 1885653..1887569 (-) 1917 WP_002311340.1 heavy metal translocating P-type ATPase -
  IBL27_RS09240 - 1887668..1887874 (+) 207 Protein_1783 MerR family DNA-binding transcriptional regulator -
  IBL27_RS09245 (IBL27_09245) - 1888596..1889282 (-) 687 WP_002309255.1 4'-phosphopantetheinyl transferase family protein -
  IBL27_RS09250 (IBL27_09250) - 1889396..1890155 (-) 760 Protein_1785 IS5 family transposase -
  IBL27_RS10105 - 1890440..1890607 (+) 168 Protein_1786 UTRA domain-containing protein -
  IBL27_RS10110 treR 1890580..1890783 (+) 204 WP_370464372.1 hypothetical protein Regulator
  IBL27_RS09260 (IBL27_09260) - 1891237..1893024 (-) 1788 WP_024784374.1 ABC transporter ATP-binding protein -
  IBL27_RS09265 (IBL27_09265) - 1893028..1894734 (-) 1707 WP_002309260.1 ABC transporter ATP-binding protein -
  IBL27_RS09270 (IBL27_09270) - 1894728..1895420 (-) 693 WP_002279478.1 4'-phosphopantetheinyl transferase family protein -

Sequence

Protein


Download         Length: 67 a.a.        Molecular weight: 8121.26 Da        Isoelectric Point: 10.2683

>NTDB_id=419852 IBL27_RS10110 WP_370464372.1 1890580..1890783(+) (treR) [Streptococcus mutans B04Sm5]
MAYTQKEITAEPTSHEERQLMKSQDVYMALIRSRVYLSSTQQFQYTESKHKIDKFKFVNFARRKHSF

Nucleotide


Download         Length: 204 bp        

>NTDB_id=419852 IBL27_RS10110 WP_370464372.1 1890580..1890783(+) (treR) [Streptococcus mutans B04Sm5]
ATTGCTTACACCCAGAAGGAGATTACTGCCGAACCTACCAGCCACGAGGAGAGACAGCTAATGAAGTCTCAGGATGTCTA
TATGGCCCTGATCAGATCCCGCGTCTACCTTAGCAGCACCCAGCAATTTCAATATACCGAAAGCAAGCACAAAATTGATA
AATTTAAATTTGTTAATTTCGCCCGTAGAAAACACTCCTTCTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

46.875

95.522

0.448