Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   GXN75_RS14745 Genome accession   NZ_CP048103
Coordinates   2998583..2999536 (+) Length   317 a.a.
NCBI ID   WP_076525476.1    Uniprot ID   A0A1N7N8H6
Organism   Kroppenstedtia eburnea strain DSM 45196     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2993583..3004536
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GXN75_RS17865 - 2993776..2994015 (+) 240 WP_268766677.1 dihydrofolate reductase family protein -
  GXN75_RS14725 (GXN75_14685) - 2994226..2995713 (+) 1488 WP_076525481.1 alkaline phosphatase family protein -
  GXN75_RS14730 (GXN75_14690) - 2996151..2996405 (+) 255 WP_076525480.1 hypothetical protein -
  GXN75_RS14735 (GXN75_14695) - 2996967..2998028 (-) 1062 WP_040387408.1 permease -
  GXN75_RS14740 (GXN75_14700) - 2998166..2998519 (+) 354 WP_143457128.1 hypothetical protein -
  GXN75_RS14745 (GXN75_14705) ceuB 2998583..2999536 (+) 954 WP_076525476.1 ABC transporter permease Machinery gene
  GXN75_RS14750 (GXN75_14710) - 2999526..3000470 (+) 945 WP_076525473.1 iron chelate uptake ABC transporter family permease subunit -
  GXN75_RS14755 (GXN75_14715) - 3000467..3001225 (+) 759 WP_009709970.1 ABC transporter ATP-binding protein -
  GXN75_RS14760 (GXN75_14720) - 3001310..3002242 (+) 933 WP_076525471.1 siderophore ABC transporter substrate-binding protein -
  GXN75_RS18150 - 3002438..3003401 (-) 964 Protein_2940 glycine betaine ABC transporter substrate-binding protein -
  GXN75_RS18155 - 3003393..3004142 (-) 750 Protein_2941 proline/glycine betaine ABC transporter permease -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34782.90 Da        Isoelectric Point: 9.2116

>NTDB_id=419785 GXN75_RS14745 WP_076525476.1 2998583..2999536(+) (ceuB) [Kroppenstedtia eburnea strain DSM 45196]
MKLRYLLIALLVLSVISIFVGVQELTPLDLFHLGDHQTLILLSSRLPRLISIIIAGSSISICGLIMQQLSRNKFVSPTTA
GTMDAARLGVLVSLLVFTSASPLTKMLVAFAFALGGTLLFMQILDRIKMKDTIFIPLVGLMFGNIISSIATFIAYKYDLI
QNMSSWLHGDFSMIVSGQFELIYISIPLLILAYFFADKFTIAGMGEEFAKNLGLNYQQIVRIGLAIVAMVTACVVLTVGM
IPFLGLIIPNIVSLYQGDHLKKSLSHTAALGAVFVLFCDILGRIVIYPYEISISLTVGIIGSGIFIYLLLRRRAYDT

Nucleotide


Download         Length: 954 bp        

>NTDB_id=419785 GXN75_RS14745 WP_076525476.1 2998583..2999536(+) (ceuB) [Kroppenstedtia eburnea strain DSM 45196]
GTGAAACTGAGATATTTATTGATCGCCTTACTCGTCTTGTCCGTCATCTCCATCTTTGTGGGGGTTCAGGAGCTGACTCC
CCTCGATCTTTTCCATCTGGGGGATCATCAAACGCTGATTTTGCTGAGCAGCCGGCTCCCCCGCCTCATCAGCATCATTA
TCGCCGGCAGCAGCATCAGTATTTGCGGTTTGATCATGCAACAGCTCAGCCGCAACAAATTTGTGTCTCCGACAACGGCG
GGGACGATGGATGCAGCCCGACTGGGAGTCCTGGTCTCTCTGCTCGTCTTCACATCGGCGAGTCCCTTGACCAAAATGCT
CGTCGCCTTCGCCTTTGCACTGGGCGGAACTCTGCTGTTTATGCAAATTTTGGACCGCATTAAAATGAAAGACACGATTT
TCATTCCCCTCGTCGGTCTGATGTTCGGCAATATCATCAGTTCCATCGCCACCTTCATCGCCTATAAGTATGATCTGATT
CAAAATATGTCTTCTTGGTTGCATGGGGATTTTTCCATGATCGTGTCCGGACAGTTTGAACTGATCTACATAAGCATCCC
GTTGCTGATCCTCGCCTATTTTTTTGCAGATAAGTTCACGATCGCGGGGATGGGCGAAGAGTTTGCGAAAAACCTCGGGT
TGAATTATCAGCAGATTGTCCGGATCGGTCTGGCCATCGTCGCCATGGTGACCGCCTGCGTCGTTTTGACTGTGGGAATG
ATCCCCTTTCTCGGCCTGATCATTCCCAATATCGTTTCCCTCTACCAGGGGGATCATCTGAAAAAGAGCCTTTCTCATAC
AGCGGCACTGGGAGCGGTCTTCGTCTTGTTCTGCGACATCCTTGGGCGTATCGTCATCTATCCCTACGAGATCTCGATCA
GTTTGACAGTGGGGATCATCGGAAGCGGTATCTTCATCTATCTGCTGTTGAGGAGAAGGGCATATGACACCTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1N7N8H6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.651

99.369

0.533

Multiple sequence alignment