Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   IBL27_RS03405 Genome accession   NZ_CP061071
Coordinates   661546..662025 (+) Length   159 a.a.
NCBI ID   WP_002266205.1    Uniprot ID   -
Organism   Streptococcus mutans B04Sm5     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 656546..667025
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IBL27_RS03380 (IBL27_03380) - 657022..657810 (+) 789 WP_002274121.1 Nif3-like dinuclear metal center hexameric protein -
  IBL27_RS03385 (IBL27_03385) rfbA 658106..658975 (+) 870 WP_002263084.1 glucose-1-phosphate thymidylyltransferase RfbA -
  IBL27_RS03390 (IBL27_03390) - 658977..659573 (+) 597 WP_002308641.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  IBL27_RS03395 (IBL27_03395) - 659636..659812 (+) 177 WP_002266207.1 hypothetical protein -
  IBL27_RS03400 (IBL27_03400) rfbB 660205..661251 (+) 1047 WP_002308639.1 dTDP-glucose 4,6-dehydratase -
  IBL27_RS03405 (IBL27_03405) mutX 661546..662025 (+) 480 WP_002266205.1 NUDIX hydrolase Machinery gene
  IBL27_RS03410 (IBL27_03410) - 662095..663264 (+) 1170 WP_002264617.1 AI-2E family transporter -
  IBL27_RS03415 (IBL27_03415) - 663254..664486 (+) 1233 WP_002308638.1 tetratricopeptide repeat protein -
  IBL27_RS03420 (IBL27_03420) alsS 664619..666298 (+) 1680 WP_002267740.1 acetolactate synthase AlsS -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18902.56 Da        Isoelectric Point: 5.6540

>NTDB_id=419782 IBL27_RS03405 WP_002266205.1 661546..662025(+) (mutX) [Streptococcus mutans B04Sm5]
MTKLATICYIDNGRELLLMHRNKKPNDVHEGKWISVGGKLEKGESPDECARREIFEETHLIVKQMDFKGIITFPDFTPGH
DWYTYVFKVRDFEGRLISDKDSREGTLEWVPYNQVLTKPTWEGDYEIFKWILDDAPFFSAKFVYQEQKLVDKHVIFYEK

Nucleotide


Download         Length: 480 bp        

>NTDB_id=419782 IBL27_RS03405 WP_002266205.1 661546..662025(+) (mutX) [Streptococcus mutans B04Sm5]
ATGACAAAATTAGCAACAATTTGTTATATTGATAACGGGCGCGAGCTTTTATTGATGCATCGTAATAAAAAACCGAATGA
TGTTCATGAAGGTAAATGGATTAGTGTAGGTGGAAAATTGGAAAAAGGAGAGAGTCCTGATGAATGTGCCAGACGTGAAA
TTTTTGAGGAGACTCATTTAATTGTCAAACAAATGGATTTTAAAGGCATTATTACTTTTCCAGATTTCACACCGGGTCAC
GATTGGTATACTTATGTGTTTAAGGTAAGAGATTTTGAAGGTCGGTTGATTTCTGATAAAGACAGTCGTGAAGGAACGTT
GGAATGGGTACCTTATAATCAGGTTTTAACTAAGCCAACATGGGAAGGCGACTATGAAATTTTTAAATGGATCTTAGACG
ATGCCCCCTTTTTCTCTGCCAAATTTGTTTATCAAGAGCAAAAGCTAGTTGATAAACATGTGATTTTTTATGAAAAATAG

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(4-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

68.987

99.371

0.686

Multiple sequence alignment