Detailed information NTG0419647

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: GWQ43_RS15850
• Genome accession: NZ_CP048039
• Coordinates: 3448333..3449397 (-)
• Length: 354 a.a.
• NCBI ID: WP_338015735.1
• Uniprot ID: -
• Organism: Alcaligenes faecalis strain MUB14
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3443333..3454397

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GWQ43_RS15825 (GWQ43_15800)	nusB	3443431..3443946 (-)	516	WP_045931247.1	transcription antitermination factor NusB	-
GWQ43_RS15830 (GWQ43_15805)	ribH	3443900..3444418 (-)	519	WP_042488798.1	6,7-dimethyl-8-ribityllumazine synthase	-
GWQ43_RS15835 (GWQ43_15810)	ribBA	3444433..3445599 (-)	1167	WP_042488800.1	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	-
GWQ43_RS15840 (GWQ43_15815)	-	3445715..3446542 (+)	828	WP_045931249.1	IclR family transcriptional regulator	-
GWQ43_RS15845 (GWQ43_15820)	-	3446662..3448191 (+)	1530	WP_086069599.1	CYTH and CHAD domain-containing protein	-
GWQ43_RS15850 (GWQ43_15825)	pilA	3448333..3449397 (-)	1065	WP_338015735.1	signal recognition particle-docking protein FtsY	Machinery gene
GWQ43_RS15855 (GWQ43_15830)	rsmD	3449885..3450514 (+)	630	WP_162090748.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
GWQ43_RS15860 (GWQ43_15835)	coaD	3450535..3451041 (+)	507	WP_045931252.1	pantetheine-phosphate adenylyltransferase	-
GWQ43_RS15865 (GWQ43_15840)	-	3451127..3451384 (+)	258	WP_009454772.1	YfhL family 4Fe-4S dicluster ferredoxin	-
GWQ43_RS15870 (GWQ43_15845)	-	3451455..3451847 (-)	393	WP_162090749.1	MOSC N-terminal beta barrel domain-containing protein	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37243.83 Da
• Isoelectric Point: 5.0043

>NTDB_id=419647 GWQ43_RS15850 WP_338015735.1 3448333..3449397(-) (pilA) [Alcaligenes faecalis strain MUB14]
MPEPVPQPEPEVPPTPEPEPQPETVPVPAPAPQPEPAPAPEPEAAAPAVKTSWMSRLKQGLSRTGQSLSSLFVGAKVDET
LFEELEDALLMADAGVEATEKLITALRARVRKEKVSDAAQVKQILCDILTDHLKPLEKSFPLESSKPLVVMIAGVNGAGK
TTSIGKLAHTFQEQGAKVLLAAGDTFRAAAREQLIEWGTRNNVSVIAQDGGDPAAVAFDAVHAGRARDMGVVMVDTAGRL
PTQLHLMEELKKIKRVIGKADGQAPHEILLVVDGNTGQNAISQIRAFDAALGLTGLVVTKLDGTAKGGTLAAVAACAQGV
RPIPVYWIGVGEGMQDLQAFVAREFASALLGMNP

Nucleotide

• Length: 1065 bp

>NTDB_id=419647 GWQ43_RS15850 WP_338015735.1 3448333..3449397(-) (pilA) [Alcaligenes faecalis strain MUB14]
ATTCCTGAGCCTGTGCCGCAGCCAGAACCCGAGGTGCCGCCGACTCCTGAACCGGAGCCACAGCCAGAGACTGTTCCCGT
TCCCGCACCAGCGCCCCAGCCTGAGCCAGCTCCGGCCCCAGAGCCAGAAGCCGCCGCACCTGCGGTGAAAACCTCCTGGA
TGTCCCGCCTGAAACAGGGCTTGTCGCGTACAGGACAGAGCCTGAGTAGCCTGTTCGTCGGAGCCAAGGTTGATGAAACA
CTGTTCGAGGAACTGGAAGACGCTTTGCTGATGGCAGATGCGGGCGTCGAGGCTACCGAGAAACTGATTACCGCCTTGCG
TGCCCGTGTTCGCAAGGAAAAAGTCAGTGATGCGGCTCAGGTCAAACAAATCTTGTGCGACATCCTGACTGACCACTTGA
AGCCCTTGGAGAAATCGTTCCCTCTGGAGTCGAGCAAGCCGCTGGTTGTCATGATTGCCGGGGTGAATGGTGCAGGTAAA
ACCACGTCTATCGGTAAATTGGCCCACACCTTCCAGGAGCAGGGCGCAAAAGTCTTGCTGGCCGCCGGCGATACCTTCCG
TGCTGCTGCTCGTGAACAACTGATTGAGTGGGGCACCCGCAATAACGTCAGCGTTATTGCTCAGGATGGTGGCGACCCCG
CCGCCGTGGCTTTTGATGCGGTACATGCAGGCCGTGCCCGTGATATGGGCGTGGTCATGGTGGATACTGCCGGTCGCTTG
CCGACTCAGCTGCACCTGATGGAAGAGCTCAAGAAGATCAAGCGTGTGATTGGCAAGGCCGATGGCCAGGCTCCCCATGA
AATTCTCTTGGTTGTAGACGGCAACACTGGCCAGAACGCCATTTCCCAGATCCGTGCGTTTGATGCGGCCTTGGGGCTGA
CTGGTCTGGTTGTCACCAAGCTGGACGGTACCGCCAAAGGCGGTACGCTGGCTGCCGTTGCAGCTTGTGCGCAAGGCGTA
CGTCCTATCCCGGTTTACTGGATTGGCGTGGGCGAGGGTATGCAGGATCTGCAGGCTTTTGTGGCACGAGAGTTCGCGTC
GGCCTTGTTGGGCATGAACCCCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (65-129)

• SRP54-type protein, GTPase domain (SRP54) (148-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	58.824	86.441	0.508