Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CFU_RS04095 Genome accession   NC_015856
Coordinates   927814..928230 (+) Length   138 a.a.
NCBI ID   WP_014004782.1    Uniprot ID   G0AI44
Organism   Collimonas fungivorans Ter331     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 922814..933230
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CFU_RS04070 (CFU_0788) mtgA 923385..924080 (+) 696 WP_041741239.1 monofunctional biosynthetic peptidoglycan transglycosylase -
  CFU_RS04075 (CFU_0789) corA 924176..925141 (+) 966 WP_014004778.1 magnesium/cobalt transporter CorA -
  CFU_RS04080 (CFU_0790) hemL 925186..926469 (-) 1284 WP_014004779.1 glutamate-1-semialdehyde 2,1-aminomutase -
  CFU_RS04085 (CFU_0791) - 926540..927391 (-) 852 WP_014004780.1 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase -
  CFU_RS04090 (CFU_0792) - 927490..927642 (+) 153 WP_038495022.1 rubredoxin -
  CFU_RS04095 (CFU_0793) pilG 927814..928230 (+) 417 WP_014004782.1 response regulator Regulator
  CFU_RS04100 (CFU_0794) - 928308..928673 (+) 366 WP_041742982.1 response regulator -
  CFU_RS04105 (CFU_0795) - 928737..929330 (+) 594 WP_014004784.1 chemotaxis protein CheW -
  CFU_RS04110 (CFU_0796) - 929398..931791 (+) 2394 WP_050808467.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 138 a.a.        Molecular weight: 14934.28 Da        Isoelectric Point: 7.8793

>NTDB_id=41941 CFU_RS04095 WP_014004782.1 927814..928230(+) (pilG) [Collimonas fungivorans Ter331]
MTTSLGGVNLKVMVIDDSSTIRRSAEIFLSQAGYQVVLAEDGFDALAKVNDHKPALIFCDILMPRLDGYQTCALIKKSAK
FHATPVVMLSSKDGLFDRARGAMVGSDEYLTKPFTKDSLLKAVRQHTQTADGAIPVTA

Nucleotide


Download         Length: 417 bp        

>NTDB_id=41941 CFU_RS04095 WP_014004782.1 927814..928230(+) (pilG) [Collimonas fungivorans Ter331]
ATGACAACATCACTTGGCGGCGTCAACCTGAAGGTAATGGTGATTGACGATAGCAGCACAATCCGGCGTTCTGCGGAGAT
TTTCCTGAGCCAGGCTGGGTATCAGGTGGTACTTGCCGAAGACGGCTTCGATGCCTTGGCGAAAGTTAACGATCACAAGC
CTGCGCTGATCTTCTGTGACATCCTGATGCCGCGCCTGGATGGTTATCAGACTTGCGCCTTGATCAAGAAGAGCGCCAAA
TTCCATGCTACGCCGGTGGTCATGTTGTCGTCCAAGGACGGCTTGTTTGACCGTGCGCGCGGCGCCATGGTCGGTTCCGA
CGAATATCTCACCAAGCCGTTTACCAAAGACAGTCTGCTGAAGGCGGTGCGCCAGCACACGCAGACGGCGGACGGTGCCA
TCCCGGTTACTGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G0AI44

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

63.636

87.681

0.558

Multiple sequence alignment