Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   GWC79_RS03575 Genome accession   NZ_CP048008
Coordinates   729075..729983 (+) Length   302 a.a.
NCBI ID   WP_002478513.1    Uniprot ID   -
Organism   Staphylococcus lugdunensis strain CGMH-SL118     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 724075..734983
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GWC79_RS03555 wecB 725092..726231 (+) 1140 WP_002478510.1 non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase -
  GWC79_RS03560 - 726417..727865 (-) 1449 WP_228865441.1 alkaline phosphatase -
  GWC79_RS13725 - 728084..728188 (+) 105 Protein_696 hypothetical protein -
  GWC79_RS03570 braR 728404..729069 (+) 666 WP_002460617.1 response regulator transcription factor Regulator
  GWC79_RS03575 braS 729075..729983 (+) 909 WP_002478513.1 sensor histidine kinase Regulator
  GWC79_RS03580 - 730089..730838 (+) 750 WP_002478514.1 ABC transporter ATP-binding protein -
  GWC79_RS03585 - 730861..732822 (+) 1962 WP_225307314.1 FtsX-like permease family protein -
  GWC79_RS03590 - 732864..733313 (+) 450 WP_002478516.1 DUF4064 domain-containing protein -
  GWC79_RS03595 - 733400..733879 (+) 480 WP_002478517.1 DUF4064 domain-containing protein -
  GWC79_RS03600 - 734152..734748 (+) 597 WP_012990693.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 302 a.a.        Molecular weight: 35307.95 Da        Isoelectric Point: 7.1983

>NTDB_id=419368 GWC79_RS03575 WP_002478513.1 729075..729983(+) (braS) [Staphylococcus lugdunensis strain CGMH-SL118]
MTMFFDTIKRELIITAMALVVFLVIFFVFNLPYYAYFLGSGIMLFIMVIYWFIALSEFKKQQRLTSQLKVLEQEVQQLKS
KQTQYQNDIESYFLTWVHQIKTPITASKLLLERNEDNVVNRVRQEIIQIDNYTSLALSYLKLMNHETDMSFTKVTVNELV
KPLIMKYSIQFIDQHTRIHYDRSDEEVLTDVQWASIMIEQILNNALKYARGKDIWLTFDKDINVLSIKDNGVGISTADLP
KIFDKGYSGYNGRLNEQSTGIGLFIVKHISNHIHHQVEVDSKLGQGTTFKIYFPKVDKMNEL

Nucleotide


Download         Length: 909 bp        

>NTDB_id=419368 GWC79_RS03575 WP_002478513.1 729075..729983(+) (braS) [Staphylococcus lugdunensis strain CGMH-SL118]
ATGACAATGTTCTTTGACACAATTAAGCGTGAACTGATCATCACCGCAATGGCATTAGTTGTTTTTTTAGTAATCTTTTT
TGTCTTTAATTTGCCCTACTATGCCTACTTTTTAGGAAGTGGCATTATGTTATTTATCATGGTTATTTATTGGTTTATCG
CATTGAGCGAGTTTAAAAAGCAACAACGATTGACATCTCAACTTAAAGTGTTAGAACAAGAAGTTCAACAATTAAAAAGC
AAGCAAACGCAATACCAAAATGACATCGAAAGCTATTTTCTTACTTGGGTACATCAAATTAAAACACCGATCACTGCCTC
CAAACTATTACTCGAACGTAATGAAGACAATGTTGTTAACCGTGTCCGACAAGAAATAATTCAAATTGATAATTACACTA
GTTTAGCTTTAAGCTATTTAAAATTAATGAATCATGAAACTGACATGAGCTTTACTAAAGTAACTGTCAATGAATTGGTT
AAGCCATTAATAATGAAATATTCAATACAATTTATCGATCAACATACACGTATACATTATGATCGCTCAGATGAAGAAGT
ATTGACAGATGTGCAATGGGCTTCCATTATGATAGAGCAAATTTTGAATAATGCACTAAAATATGCTCGTGGTAAAGATA
TTTGGTTAACTTTTGATAAAGATATAAACGTACTGTCTATCAAAGATAATGGTGTGGGTATTAGTACTGCTGATTTACCG
AAAATTTTTGATAAAGGTTATTCTGGTTATAATGGTCGTTTAAATGAGCAATCAACTGGTATTGGATTGTTTATAGTAAA
ACATATATCGAATCATATTCATCATCAAGTAGAAGTAGATTCTAAGCTAGGTCAAGGTACGACATTTAAGATTTATTTTC
CTAAGGTAGATAAAATGAATGAACTATAG

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(196-295)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

59.107

96.358

0.57

Multiple sequence alignment