Detailed information NTG0419345

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: GWC80_RS07050
• Genome accession: NZ_CP048007
• Coordinates: 1465859..1466833 (+)
• Length: 324 a.a.
• NCBI ID: WP_002491905.1
• Uniprot ID: -
• Organism: Staphylococcus lugdunensis strain CGMH-SL131
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1460859..1471833

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GWC80_RS07015	rpmG	1461283..1461432 (+)	150	WP_001830957.1	50S ribosomal protein L33	-
GWC80_RS07020	-	1461682..1462218 (+)	537	WP_002459008.1	5-formyltetrahydrofolate cyclo-ligase	-
GWC80_RS07025	-	1462235..1463692 (+)	1458	WP_002491909.1	rhomboid family intramembrane serine protease	-
GWC80_RS07030	-	1463676..1463879 (+)	204	WP_002459010.1	YqgQ family protein	-
GWC80_RS07035	-	1463876..1464862 (+)	987	WP_002491907.1	ROK family glucokinase	-
GWC80_RS07040	-	1464862..1465185 (+)	324	WP_002459012.1	MTH1187 family thiamine-binding protein	-
GWC80_RS07045	-	1465189..1465812 (+)	624	WP_002459013.1	MBL fold metallo-hydrolase	-
GWC80_RS07050	comGA	1465859..1466833 (+)	975	WP_002491905.1	competence type IV pilus ATPase ComGA	Machinery gene
GWC80_RS07055	comGB	1466805..1467869 (+)	1065	WP_002478130.1	competence type IV pilus assembly protein ComGB	-
GWC80_RS07060	comGC	1467884..1468198 (+)	315	WP_002459016.1	competence type IV pilus major pilin ComGC	Machinery gene
GWC80_RS07065	comGD	1468131..1468625 (+)	495	WP_225306455.1	competence type IV pilus minor pilin ComGD	-
GWC80_RS07070	-	1468612..1468905 (+)	294	WP_002459018.1	hypothetical protein	-
GWC80_RS07075	-	1468967..1469326 (+)	360	WP_002459019.1	competence type IV pilus minor pilin ComGF	-
GWC80_RS07080	-	1469480..1469998 (+)	519	WP_002459021.1	shikimate kinase	-
GWC80_RS07085	gcvT	1470168..1471259 (+)	1092	WP_037540763.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 36993.89 Da
• Isoelectric Point: 8.2830

>NTDB_id=419345 GWC80_RS07050 WP_002491905.1 1465859..1466833(+) (comGA) [Staphylococcus lugdunensis strain CGMH-SL131]
MKILFKEIVNKAIQQNASDIHFIPSQTTVIIKFRVNDQLVYYEELNLSIYTKLLTFMKFQAGLDISTHQIAQSGRYTYQY
KQQYYLRISTLPLSLGTESCVIRIVPQYFQQHKTCYQFNDFKQFMNKKQGLLLFSGPTGSGKSTLMYQMVLYAQQELNLN
VITIEDPVEQLISGITQVSVNDKAGINYVSTFKAILRCDPDVILIGEIRNASIAKCVIQASLSGHLVLSTIHANNCKGTL
LRLLEMGISVQEICQSINLISNQRLITTLNQQRALVCEMMINHQIEYFFEHNHTLPKSFHHLSQLIGNMSKEGVICEETA
NKYT

Nucleotide

• Length: 975 bp

>NTDB_id=419345 GWC80_RS07050 WP_002491905.1 1465859..1466833(+) (comGA) [Staphylococcus lugdunensis strain CGMH-SL131]
ATGAAAATATTATTTAAGGAAATTGTTAACAAAGCGATACAACAGAATGCAAGTGATATTCACTTTATTCCAAGTCAAAC
TACTGTCATCATTAAATTTCGTGTTAATGACCAACTTGTATATTATGAAGAATTAAATTTAAGCATCTATACTAAACTGT
TAACGTTTATGAAATTTCAAGCTGGCTTAGATATATCAACACATCAAATCGCCCAAAGTGGAAGATATACCTATCAATAT
AAGCAACAATATTACTTAAGAATCTCAACTTTACCACTATCATTAGGTACAGAAAGTTGCGTCATTCGTATCGTACCACA
ATACTTTCAACAACATAAAACGTGTTACCAATTTAATGATTTCAAACAGTTTATGAATAAAAAGCAAGGATTGTTATTAT
TTAGTGGTCCAACTGGATCTGGTAAAAGTACACTGATGTATCAAATGGTTTTATATGCACAACAAGAGCTTAATTTAAAT
GTTATTACAATTGAAGATCCAGTTGAACAATTGATATCAGGCATTACACAAGTATCTGTAAATGATAAAGCAGGCATTAA
TTATGTATCAACATTTAAAGCTATTCTGCGCTGTGATCCTGATGTTATCTTAATTGGCGAAATTAGAAATGCCAGTATCG
CAAAATGTGTTATTCAGGCAAGTTTAAGTGGCCATTTAGTATTATCTACAATTCACGCAAACAACTGCAAAGGAACTTTA
TTAAGATTATTAGAAATGGGAATTTCAGTTCAAGAAATATGTCAATCAATTAATTTAATCTCTAATCAAAGACTCATTAC
CACCCTAAATCAACAACGAGCATTGGTTTGCGAAATGATGATAAATCATCAAATAGAATACTTTTTTGAACATAATCATA
CCTTGCCTAAATCATTTCATCATTTATCACAGTTAATTGGTAACATGTCAAAAGAAGGGGTCATTTGTGAAGAAACTGCT
AATAAATATACTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (8-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	70.588	99.691	0.704
comGA	Staphylococcus aureus N315	70.588	99.691	0.704