Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   GWK37_RS13410 Genome accession   NZ_CP048002
Coordinates   2715295..2716086 (+) Length   263 a.a.
NCBI ID   WP_053285207.1    Uniprot ID   -
Organism   Bacillus velezensis strain CACC 316     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 2710295..2721086
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GWK37_RS13385 (GWK37_13395) - 2712288..2713172 (+) 885 WP_115941293.1 PhzF family phenazine biosynthesis isomerase -
  GWK37_RS13390 (GWK37_13400) - 2713249..2713833 (+) 585 WP_007408549.1 nitroreductase family protein -
  GWK37_RS13395 (GWK37_13405) - 2713874..2714065 (-) 192 WP_013351432.1 YfhD family protein -
  GWK37_RS13400 (GWK37_13410) - 2714136..2714246 (-) 111 WP_003155504.1 YfhE family protein -
  GWK37_RS13405 (GWK37_13415) - 2714304..2715203 (-) 900 WP_110124595.1 TIGR01777 family oxidoreductase -
  GWK37_RS13410 (GWK37_13420) recX 2715295..2716086 (+) 792 WP_053285207.1 recombination regulator RecX Regulator
  GWK37_RS13415 (GWK37_13425) - 2716093..2716407 (+) 315 WP_007408553.1 YfhH family protein -
  GWK37_RS13420 (GWK37_13430) - 2716553..2717746 (+) 1194 WP_025284446.1 MFS transporter -
  GWK37_RS13425 (GWK37_13435) - 2717786..2718175 (-) 390 WP_061861286.1 DUF2606 family protein -
  GWK37_RS13430 (GWK37_13440) - 2718138..2719049 (-) 912 WP_014417237.1 trypsin-like serine peptidase -
  GWK37_RS13435 (GWK37_13445) - 2719194..2719346 (-) 153 WP_003155495.1 small, acid-soluble spore protein K -
  GWK37_RS13440 (GWK37_13450) - 2719470..2719739 (+) 270 WP_003155492.1 YfhJ family protein -
  GWK37_RS13445 (GWK37_13455) - 2719871..2720398 (+) 528 WP_017419151.1 SH3 domain-containing protein -
  GWK37_RS13450 (GWK37_13460) - 2720484..2720819 (+) 336 WP_017419152.1 SdpI family protein -

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 30909.07 Da        Isoelectric Point: 6.0196

>NTDB_id=419246 GWK37_RS13410 WP_053285207.1 2715295..2716086(+) (recX) [Bacillus velezensis strain CACC 316]
MPFITKISTQKKNTERFNIFLDEKYAFSVDADVLVRFDLKKGKELDELDILEIQHGDDVKKAFNRAVEFLSYRMRSEKEV
RDHLKKKETPDMVISEVIHKLYDYSYLNDKEFAEAYASTHKKTNGKGPDVLFRELKAKGIDDDTIKETLSAFTFDEQIQE
ALKHIGKILKKDKKLSTKEIRQRAQMQLQRKGFPFDVINAALEQTEYENDDEAEMEALKAHAEKAIRKYRYDGSYESGMK
VKQYLFRKGFSIDDIDQFLQEEE

Nucleotide


Download         Length: 792 bp        

>NTDB_id=419246 GWK37_RS13410 WP_053285207.1 2715295..2716086(+) (recX) [Bacillus velezensis strain CACC 316]
ATGCCGTTTATTACAAAAATATCGACCCAAAAGAAAAATACCGAGCGCTTCAACATCTTTCTTGATGAGAAATATGCATT
CAGCGTCGACGCCGACGTGCTTGTGCGTTTTGACCTGAAGAAAGGGAAAGAACTGGACGAGCTTGACATTCTTGAAATCC
AGCACGGCGATGACGTGAAAAAAGCCTTTAATCGCGCCGTAGAATTTTTATCATACCGGATGCGCTCTGAAAAAGAAGTC
CGGGATCATCTGAAGAAAAAAGAAACACCGGATATGGTCATTTCTGAAGTCATCCATAAACTGTACGATTACAGCTACTT
AAATGACAAAGAATTTGCGGAAGCTTATGCGAGCACCCACAAAAAAACAAACGGCAAAGGCCCTGACGTCCTGTTCCGCG
AGCTGAAAGCGAAAGGAATAGACGACGATACCATCAAGGAGACGCTCAGCGCGTTTACATTTGATGAGCAAATACAAGAA
GCGCTGAAACATATCGGCAAAATCCTCAAAAAAGACAAAAAGCTGTCCACAAAAGAGATCAGACAGCGGGCGCAGATGCA
GCTTCAGCGAAAAGGTTTCCCTTTCGACGTCATCAATGCCGCTCTGGAACAGACGGAGTATGAAAATGATGATGAAGCCG
AGATGGAAGCTCTGAAGGCTCATGCGGAAAAAGCGATCAGGAAATACCGCTATGACGGCAGTTATGAAAGCGGAATGAAG
GTCAAACAGTACTTATTCAGAAAAGGATTCTCGATTGACGATATTGATCAATTCTTGCAGGAAGAGGAGTAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-206)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

79.087

100

0.791

Multiple sequence alignment