Detailed information NTG0419220

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: IBB97_RS09735
• Genome accession: NZ_CP061021
• Coordinates: 1864395..1865663 (-)
• Length: 422 a.a.
• NCBI ID: WP_138496457.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain 24739
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1859395..1870663

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IBB97_RS09705 (IBB97_09725)	-	1859656..1860483 (+)	828	WP_232085691.1	radical SAM protein	-
IBB97_RS09710 (IBB97_09730)	-	1860476..1862017 (+)	1542	WP_014622049.1	ABC transporter ATP-binding protein	-
IBB97_RS09715 (IBB97_09735)	-	1862421..1862933 (-)	513	WP_014608793.1	helix-turn-helix transcriptional regulator	-
IBB97_RS09720 (IBB97_09740)	-	1863249..1863953 (+)	705	Protein_1866	site-specific integrase	-
IBB97_RS09735 (IBB97_09755)	rarA	1864395..1865663 (-)	1269	WP_138496457.1	replication-associated recombination protein A	Machinery gene
IBB97_RS09740 (IBB97_09760)	rpmB	1865833..1866021 (+)	189	WP_084826191.1	50S ribosomal protein L28	-
IBB97_RS09745 (IBB97_09765)	-	1866148..1866414 (+)	267	WP_002952186.1	IreB family regulatory phosphoprotein	-
IBB97_RS09750 (IBB97_09770)	ruvX	1866414..1866833 (+)	420	WP_011681732.1	Holliday junction resolvase RuvX	-
IBB97_RS09755 (IBB97_09775)	-	1866942..1867247 (+)	306	WP_011681733.1	DUF1292 domain-containing protein	-
IBB97_RS09760 (IBB97_09780)	-	1867460..1869106 (+)	1647	WP_138496459.1	hypothetical protein	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 46448.01 Da
• Isoelectric Point: 7.0888

>NTDB_id=419220 IBB97_RS09735 WP_138496457.1 1864395..1865663(-) (rarA) [Streptococcus thermophilus strain 24739]
MPDNLALRMRPRSISEVIGQKHLVGEGKIIRRMVEANMLSSMILYGPPGIGKTSIASAIAGTTKFAFRTFNATVDSKKRL
QEIAEEAKFSGGLVLLLDEIHRLDKAKQDFLLPLLENGNIIMIGATTENPFFSVTPAIRSRVQIFELEPLSNEDIKEAIL
NVLGDKERGFAFEVHLDDDALDFIATATNGDLRSAYNSLDLAVMSTPASGNGQHHITLDIVEKSLQRSYITMDKDGDGHY
DVLSALQKSIRGSDVNASLHYAARLVEAGDLPSLARRLTVIAYEDIGLANPDAQVHTVTALEAAQKIGFPEARILIANVV
IDLALSPKSNSAYKAMDAALAELRKSGNLPIPRHLRDGHYAGSKALGNAQDYKYPHAYPEKWVKQQYLPDKLRGVNYFQP
NETGKYERALGANKERIDKLSR

Nucleotide

• Length: 1269 bp

>NTDB_id=419220 IBB97_RS09735 WP_138496457.1 1864395..1865663(-) (rarA) [Streptococcus thermophilus strain 24739]
ATGCCAGATAATCTTGCCTTACGCATGCGTCCACGTTCAATTTCAGAGGTGATTGGTCAGAAACATTTAGTTGGTGAAGG
TAAAATTATTCGCCGTATGGTAGAGGCGAATATGCTGTCGTCAATGATTCTCTACGGACCTCCAGGAATCGGGAAAACCT
CGATAGCCAGTGCTATTGCAGGAACAACAAAATTTGCTTTTAGAACTTTTAATGCCACTGTCGATAGCAAAAAACGTCTA
CAGGAAATTGCAGAAGAGGCTAAATTTTCAGGTGGTTTAGTTCTACTTCTAGATGAGATCCATCGTTTGGATAAAGCAAA
ACAAGATTTTTTGTTACCATTATTAGAGAACGGAAATATTATCATGATTGGTGCCACAACCGAGAATCCGTTTTTTTCTG
TAACACCAGCCATCCGTAGCCGTGTACAAATATTTGAGTTGGAACCACTCTCTAATGAAGATATCAAGGAAGCTATTTTG
AATGTTCTAGGGGACAAGGAGCGTGGCTTCGCCTTTGAGGTTCACTTAGATGATGATGCTCTAGATTTTATTGCGACAGC
TACTAATGGTGATTTACGATCGGCATATAATTCTTTGGATCTGGCTGTCATGTCGACACCAGCTTCAGGAAATGGTCAGC
ATCATATTACCCTAGACATAGTGGAAAAAAGCTTACAACGCAGTTATATTACTATGGATAAAGACGGTGATGGGCACTAT
GATGTCCTTTCTGCCTTGCAAAAATCTATTCGAGGATCTGATGTTAATGCCAGTCTTCACTATGCGGCACGTTTGGTTGA
GGCAGGGGATTTGCCTAGTCTAGCACGTCGCTTGACTGTGATTGCCTATGAGGATATTGGTTTAGCTAATCCAGATGCAC
AAGTTCACACGGTCACAGCCTTGGAAGCTGCACAGAAAATAGGTTTTCCGGAGGCACGTATTTTGATTGCCAACGTAGTT
ATTGACTTAGCATTATCACCTAAGTCGAATTCGGCTTATAAGGCAATGGATGCTGCCCTGGCGGAACTTAGAAAGTCTGG
GAATTTACCTATTCCGCGTCATCTGAGAGATGGACACTATGCTGGAAGTAAGGCACTGGGTAATGCACAAGATTATAAGT
ATCCACATGCCTATCCTGAAAAGTGGGTTAAGCAACAATACCTTCCAGATAAATTAAGAGGAGTCAATTATTTCCAACCT
AATGAAACTGGGAAATACGAAAGAGCTCTTGGAGCTAATAAAGAACGAATCGATAAGTTATCTAGATAA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-415)

• AAA C-terminal domain (AAA_assoc_2) (173-251)

• ATPase family associated with various cellular activities (AAA) (AAA) (42-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	59.427	99.289	0.59