Detailed information NTG0041920

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: CE10_RS23755
• Genome accession: NC_017646
• Coordinates: 4690737..4691762 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli O7:K1 str. CE10
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4685737..4696762

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CE10_RS23730 (CE10_4599)	rraA	4686152..4686637 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
CE10_RS23735 (CE10_4600)	menA	4686730..4687656 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
CE10_RS23740 (CE10_4601)	hslU	4687723..4689054 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
CE10_RS23745 (CE10_4602)	hslV	4689064..4689594 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
CE10_RS23750 (CE10_4603)	ftsN	4689686..4690645 (-)	960	WP_000068834.1	cell division protein FtsN	-
CE10_RS23755 (CE10_4604)	cytR	4690737..4691762 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
CE10_RS23760 (CE10_4605)	priA	4691918..4694116 (-)	2199	WP_012602488.1	primosomal protein N'	Machinery gene
CE10_RS23765 (CE10_4606)	rpmE	4694319..4694531 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
CE10_RS23770 (CE10_4607)	yiiX	4694592..4695200 (-)	609	WP_000702317.1	YiiX family permuted papain-like enzyme	-
CE10_RS23775 (CE10_4608)	metJ	4695260..4695577 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=41920 CE10_RS23755 WP_000644904.1 4690737..4691762(-) (cytR) [Escherichia coli O7:K1 str. CE10]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=41920 CE10_RS23755 WP_000644904.1 4690737..4691762(-) (cytR) [Escherichia coli O7:K1 str. CE10]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAGCACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628