Detailed information NTG0419165

Bioinformatically predicted

Overview

• Name: luxP
• Type: Regulator
• Locus tag: GSS20_RS20630
• Genome accession: NZ_CP047996
• Coordinates: 1113790..1114887 (-)
• Length: 365 a.a.
• NCBI ID: WP_005463467.1
• Uniprot ID: Q87GU4
• Organism: Vibrio parahaemolyticus strain 20150710009
• Function: autoinducer sensor (predicted from homology) Competence regulation

Genomic Context

Location: 1108790..1119887

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GSS20_RS20615 (GSS20_21765)	-	1109454..1110509 (-)	1056	WP_025623626.1	HlyD family secretion protein	-
GSS20_RS20620 (GSS20_21770)	-	1110547..1111002 (-)	456	WP_162457515.1	MarR family transcriptional regulator	-
GSS20_RS20625 (GSS20_21775)	luxQ	1111214..1113790 (-)	2577	WP_140093567.1	quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ	-
GSS20_RS20630 (GSS20_21780)	luxP	1113790..1114887 (-)	1098	WP_005463467.1	autoinducer 2-binding periplasmic protein LuxP	Regulator
GSS20_RS20635 (GSS20_21785)	-	1115239..1115559 (-)	321	WP_005463466.1	GIY-YIG nuclease family protein	-
GSS20_RS20640 (GSS20_21790)	-	1115556..1116206 (-)	651	WP_017447360.1	YceH family protein	-
GSS20_RS20645 (GSS20_21795)	-	1116383..1116598 (-)	216	WP_005477197.1	hypothetical protein	-
GSS20_RS20650 (GSS20_21805)	-	1116926..1117240 (+)	315	WP_005453573.1	DUF496 family protein	-
GSS20_RS20655 (GSS20_21810)	-	1117363..1118700 (+)	1338	WP_025521024.1	MATE family efflux transporter	-
GSS20_RS20660 (GSS20_21815)	-	1118774..1119751 (-)	978	WP_025558320.1	Gfo/Idh/MocA family protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41339.67 Da
• Isoelectric Point: 5.0568

>NTDB_id=419165 GSS20_RS20630 WP_005463467.1 1113790..1114887(-) (luxP) [Vibrio parahaemolyticus strain 20150710009]
MNKALVLSLISIAGMSPASQASQVLNGYWAYQEFLNEFPEQKHLTDALAAAVRDDPVPIAPEKRHPLKISVVYPGQQISD
YWIRNIDAFEKRLDKLNIDYQINQVFTRPNADIKQQSLSLMEALKSNSDYLIFTLDTTRHRKFVEHVLDSTKTKLILQNI
TTPVREWETRQPFMYVGFDHAEGSRELAVEFGKQFPKNTHYSVLYFSEGYISDIRGNTFIHQVNQDSQFELQSAYYTKAT
KQSGYEAAKASLKKYPDVEFIYACSTDVALGAVEALSELGREDVMINGWGGGSAELDAILKGELDITVMRMNDDTGIAMA
EAIKWDLEGKPVPTVYSGDFEVVTKSDSPERIEALRKRAFRYSDN

Nucleotide

• Length: 1098 bp

>NTDB_id=419165 GSS20_RS20630 WP_005463467.1 1113790..1114887(-) (luxP) [Vibrio parahaemolyticus strain 20150710009]
ATGAATAAAGCGTTAGTATTGTCCCTGATTTCAATTGCCGGCATGTCTCCGGCTTCACAAGCCTCTCAGGTTCTTAACGG
CTACTGGGCGTATCAAGAATTCTTAAATGAATTTCCAGAACAGAAACACTTAACGGATGCTCTGGCTGCGGCCGTGAGAG
ACGATCCTGTGCCTATTGCCCCTGAAAAAAGACACCCATTAAAAATCTCCGTTGTTTATCCAGGGCAGCAGATTTCCGAT
TACTGGATAAGAAACATCGACGCGTTTGAGAAGCGCTTAGATAAACTCAATATTGATTACCAAATCAATCAAGTGTTTAC
GCGACCAAACGCCGATATCAAACAACAAAGCCTTTCTTTGATGGAAGCACTGAAAAGCAATTCCGACTACTTAATTTTTA
CACTCGATACGACCCGACATCGTAAGTTTGTCGAACACGTTTTAGATTCCACCAAAACCAAACTTATCTTGCAAAATATC
ACGACGCCAGTCCGTGAATGGGAAACTCGACAGCCTTTTATGTACGTCGGTTTCGATCACGCTGAAGGCAGTCGAGAACT
CGCTGTGGAGTTTGGCAAGCAGTTCCCGAAAAATACCCATTACAGCGTTTTGTACTTCTCTGAAGGCTACATTAGCGATA
TCCGTGGTAACACATTCATTCATCAAGTGAACCAAGACAGTCAGTTTGAACTACAATCTGCTTACTATACAAAAGCGACA
AAACAGTCCGGGTATGAAGCTGCAAAAGCCAGCTTGAAAAAGTACCCAGATGTCGAGTTCATTTATGCTTGTTCTACCGA
CGTTGCGTTAGGTGCCGTCGAAGCACTGTCTGAACTTGGCCGTGAAGACGTTATGATCAATGGCTGGGGCGGTGGTTCTG
CTGAGCTAGACGCTATCTTAAAAGGGGAGTTAGATATCACCGTCATGCGTATGAATGATGATACTGGCATTGCTATGGCA
GAGGCGATTAAATGGGATTTGGAAGGTAAACCTGTACCAACGGTGTACTCTGGGGACTTCGAAGTTGTGACCAAATCAGA
TTCCCCTGAGCGAATTGAAGCTCTCAGAAAACGTGCATTTAGATACTCAGACAATTGA

Domains

Predicted by InterproScan.

• Periplasmic binding protein domain (Peripla_BP_4) (69-324)

3D structure

• AlphaFold DB: Q87GU4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxP	Vibrio cholerae strain A1552	64.56	99.726	0.644