Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   IBC08_RS02600 Genome accession   NZ_CP061019
Coordinates   490303..491109 (+) Length   268 a.a.
NCBI ID   WP_011680838.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain 24853     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 485303..496109
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IBC08_RS02580 (IBC08_02565) tuf 486350..487546 (+) 1197 WP_002949971.1 elongation factor Tu -
  IBC08_RS02585 (IBC08_02570) tpiA 487795..488553 (+) 759 WP_002946314.1 triose-phosphate isomerase -
  IBC08_RS02590 (IBC08_02575) tmk 488793..489422 (+) 630 WP_002946312.1 dTMP kinase -
  IBC08_RS02595 (IBC08_02580) - 489431..490306 (+) 876 WP_011225600.1 DNA polymerase III subunit delta' -
  IBC08_RS02600 (IBC08_02585) yaaT 490303..491109 (+) 807 WP_011680838.1 regulatory iron-sulfur-containing complex subunit RicT Regulator
  IBC08_RS02605 (IBC08_02590) yabA 491096..491416 (+) 321 WP_002946304.1 DNA replication initiation control protein YabA -
  IBC08_RS02610 (IBC08_02595) rsmI 491419..492285 (+) 867 WP_024704223.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  IBC08_RS02615 (IBC08_02600) - 492422..493657 (+) 1236 WP_179971217.1 ammonium transporter -
  IBC08_RS02620 (IBC08_02605) - 493668..494009 (+) 342 WP_084828553.1 P-II family nitrogen regulator -
  IBC08_RS02625 (IBC08_02610) - 494107..494763 (+) 657 WP_179971218.1 glycoside hydrolase family 73 protein -
  IBC08_RS02630 (IBC08_02615) - 494786..495607 (+) 822 WP_179971219.1 Cof-type HAD-IIB family hydrolase -
  IBC08_RS02635 (IBC08_02620) - 495626..496096 (-) 471 Protein_463 YgjV family protein -

Sequence

Protein


Download         Length: 268 a.a.        Molecular weight: 29758.16 Da        Isoelectric Point: 4.5847

>NTDB_id=418950 IBC08_RS02600 WP_011680838.1 490303..491109(+) (yaaT) [Streptococcus thermophilus strain 24853]
MTEVIGIKFEENGAVEYVVPDKNYTKGDFVVVLEKKDKRLAQVVMENTVFPEVSLPVDLNRVEGLASERDFARYDENLLK
AEQSMGVVADLIAQNQLDMKVVDIVFPLNSSYVLISFVAEKRVDFRQLLEDLAAYFKTRIELRQISSREESKIYGGLGPC
GRALCCSSFLGEFPPVSIKMAKNQSLSLNSGKMNGVCGRLMCCLSYEDDFYRDSKASYPDLGEEIETKEGRGQVIAIDVI
AGTVKVMFEKGGAPLTYGVEEVQLNGKA

Nucleotide


Download         Length: 807 bp        

>NTDB_id=418950 IBC08_RS02600 WP_011680838.1 490303..491109(+) (yaaT) [Streptococcus thermophilus strain 24853]
ATGACAGAAGTCATTGGAATCAAATTTGAAGAAAATGGAGCGGTAGAATACGTTGTTCCTGATAAAAATTACACCAAAGG
TGACTTTGTAGTCGTTTTGGAGAAAAAAGATAAGCGTTTAGCCCAGGTTGTTATGGAAAATACTGTTTTTCCAGAGGTTA
GTTTACCTGTGGATTTGAATCGGGTCGAAGGCTTGGCTAGTGAGAGAGATTTCGCTAGATATGATGAAAATCTTTTAAAG
GCTGAACAGAGTATGGGAGTAGTGGCTGATTTAATTGCTCAAAATCAGCTAGATATGAAAGTGGTGGACATAGTCTTTCC
TCTAAATAGCTCTTATGTGCTTATCAGTTTCGTGGCTGAAAAGCGGGTAGATTTTCGTCAATTGCTCGAGGATTTGGCGG
CTTATTTTAAGACGCGAATTGAGTTACGTCAAATTTCCAGTCGTGAGGAATCAAAAATTTATGGTGGTTTAGGTCCTTGT
GGACGTGCACTGTGTTGTTCTAGTTTTTTGGGCGAATTCCCACCGGTATCGATTAAGATGGCTAAAAATCAAAGTTTGTC
CTTGAATTCTGGTAAGATGAACGGTGTCTGTGGACGTCTCATGTGTTGTCTCAGTTATGAAGATGATTTTTACCGAGACA
GTAAGGCTAGTTATCCTGACTTGGGTGAAGAGATTGAGACCAAGGAAGGTAGAGGTCAAGTCATTGCTATTGATGTGATT
GCAGGGACTGTTAAAGTTATGTTTGAAAAAGGGGGAGCTCCCCTAACTTATGGAGTGGAGGAAGTTCAGCTAAATGGAAA
AGCGTGA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(61-145)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

42.205

98.134

0.414