Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   SALIVB_RS08465 Genome accession   NC_015760
Coordinates   1851027..1852064 (-) Length   345 a.a.
NCBI ID   WP_013991104.1    Uniprot ID   A0AA45CSE2
Organism   Streptococcus salivarius CCHSS3     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1846027..1857064
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SALIVB_RS08440 (SALIVB_1760) - 1846785..1847105 (+) 321 WP_013991101.1 hypothetical protein -
  SALIVB_RS08445 (SALIVB_1761) - 1847138..1849204 (-) 2067 WP_013991102.1 cation:proton antiporter -
  SALIVB_RS08450 (SALIVB_1762) - 1849213..1849455 (-) 243 WP_002891697.1 hypothetical protein -
  SALIVB_RS08455 (SALIVB_1763) - 1849452..1850000 (-) 549 WP_013991103.1 tRNA (mnm(5)s(2)U34)-methyltransferase -
  SALIVB_RS08460 (SALIVB_1764) - 1849997..1850941 (-) 945 WP_002891699.1 TIGR01212 family radical SAM protein -
  SALIVB_RS08465 (SALIVB_1765) sepM 1851027..1852064 (-) 1038 WP_013991104.1 SepM family pheromone-processing serine protease Regulator
  SALIVB_RS08470 (SALIVB_1766) coaD 1852081..1852578 (-) 498 WP_002891701.1 pantetheine-phosphate adenylyltransferase -
  SALIVB_RS08475 (SALIVB_1767) rsmD 1852611..1853174 (-) 564 WP_107373285.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  SALIVB_RS08480 (SALIVB_1768) trxB 1853301..1854254 (-) 954 WP_255296714.1 thioredoxin-disulfide reductase -
  SALIVB_RS08485 (SALIVB_1769) - 1854287..1854511 (-) 225 WP_002884393.1 DUF4059 family protein -
  SALIVB_RS08490 (SALIVB_1770) - 1854723..1855466 (-) 744 WP_002884313.1 amino acid ABC transporter ATP-binding protein -
  SALIVB_RS08495 (SALIVB_1771) - 1855466..1856212 (-) 747 WP_095559509.1 amino acid ABC transporter permease -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37633.11 Da        Isoelectric Point: 8.7766

>NTDB_id=41841 SALIVB_RS08465 WP_013991104.1 1851027..1852064(-) (sepM) [Streptococcus salivarius CCHSS3]
MWRIKWWLLSIFTVLFLLFALFFPLNNYYVELPGGAFDTKEVLTVDKKADDSKGSYNFVAVAQTKATLALMLYAQLNDFA
KLQTAEEATGNYSDEDFMRINQFYMETSQNQAIYQGLTLAGKEASLEYMGVYVLQVADDSSFKGVLNIADTVTAVNGKTF
DNSTDLIKYVQGLKLGSKVKVTYTTEDKEKTATGKIIKIANGKNGIGIGLTDHTEVKSPENVKFKLDGVGGPSAGLMFTL
AIYDQVSGQDLKAGRKIAGTGTIEKDGAVGDIGGAYLKVKSAADSGADIFFVPNNPVTKEMKKADPDAKTNYQEAKEAAK
KLGTKMKIVPVKTAQEAIDYLKKTK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=41841 SALIVB_RS08465 WP_013991104.1 1851027..1852064(-) (sepM) [Streptococcus salivarius CCHSS3]
ATGTGGCGTATTAAGTGGTGGTTGTTAAGTATTTTTACGGTACTTTTCCTCCTATTTGCCCTCTTTTTCCCGCTAAATAA
TTATTATGTTGAGCTTCCGGGTGGTGCTTTTGATACTAAGGAAGTCTTGACTGTAGACAAGAAAGCTGATGATTCAAAAG
GCTCCTACAATTTTGTGGCGGTGGCTCAAACCAAGGCAACTTTGGCCCTCATGCTCTATGCTCAGCTTAATGATTTTGCA
AAGCTTCAAACGGCTGAAGAGGCAACTGGAAATTACTCTGATGAAGATTTCATGCGTATCAATCAATTCTACATGGAGAC
TTCCCAAAACCAGGCGATTTATCAGGGCTTGACTCTGGCTGGTAAGGAGGCTAGCTTGGAGTATATGGGTGTTTATGTGC
TTCAGGTGGCTGATGATTCTAGTTTCAAGGGTGTCCTTAATATTGCGGATACGGTGACGGCTGTCAATGGCAAGACCTTT
GATAATTCTACTGACTTGATTAAATACGTCCAAGGACTTAAGTTGGGTTCAAAAGTCAAGGTCACTTATACGACAGAGGA
CAAAGAAAAGACTGCCACTGGTAAGATCATTAAGATTGCTAATGGTAAAAATGGTATCGGTATTGGTTTGACGGATCATA
CTGAGGTCAAGAGTCCTGAAAACGTGAAGTTTAAACTTGATGGTGTTGGTGGACCAAGTGCGGGGCTTATGTTTACTTTG
GCTATTTACGATCAGGTGTCTGGTCAAGACCTCAAGGCTGGCCGTAAAATTGCTGGAACAGGCACTATTGAAAAGGACGG
GGCTGTCGGTGATATCGGTGGGGCCTACCTCAAGGTGAAATCAGCGGCTGATAGTGGCGCAGATATTTTCTTCGTGCCAA
ATAATCCAGTAACTAAGGAAATGAAAAAGGCTGATCCGGATGCTAAGACTAATTATCAAGAGGCTAAGGAAGCTGCCAAG
AAACTGGGGACCAAGATGAAAATCGTTCCTGTTAAAACAGCTCAAGAAGCCATTGATTATTTGAAAAAGACTAAGTAA

Domains


Predicted by InterproScan.

(129-193)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

65.396

98.841

0.646


Multiple sequence alignment