Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   GWG04_RS00465 Genome accession   NZ_CP047922
Coordinates   82742..83785 (+) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain SR231     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 77742..88785
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GWG04_RS00435 (GWG04_00425) - 78224..78334 (+) 111 WP_001790257.1 hypothetical protein -
  GWG04_RS00440 (GWG04_00430) - 78363..78776 (+) 414 WP_001557448.1 hypothetical protein -
  GWG04_RS00445 (GWG04_00435) - 79207..80193 (-) 987 WP_000999717.1 aromatic acid exporter family protein -
  GWG04_RS00450 (GWG04_00440) map 80668..81426 (+) 759 WP_000636142.1 type I methionyl aminopeptidase -
  GWG04_RS00455 (GWG04_00445) - 81643..82029 (+) 387 WP_103147811.1 hypothetical protein -
  GWG04_RS00460 (GWG04_00450) liaF 82044..82745 (+) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  GWG04_RS00465 (GWG04_00455) vraS 82742..83785 (+) 1044 WP_001017131.1 sensor histidine kinase Regulator
  GWG04_RS00470 (GWG04_00460) vraR 83775..84404 (+) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  GWG04_RS00475 (GWG04_00465) - 84517..85734 (-) 1218 WP_000037075.1 YihY/virulence factor BrkB family protein -
  GWG04_RS00480 (GWG04_00470) - 86012..86287 (-) 276 WP_000428172.1 YtxH domain-containing protein -
  GWG04_RS00485 (GWG04_00475) - 86294..86758 (-) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  GWG04_RS00490 (GWG04_00480) - 86905..87105 (+) 201 WP_000180460.1 DUF1128 family protein -
  GWG04_RS00495 (GWG04_00485) - 87108..88364 (+) 1257 WP_001795108.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=418393 GWG04_RS00465 WP_001017131.1 82742..83785(+) (vraS) [Staphylococcus aureus strain SR231]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=418393 GWG04_RS00465 WP_001017131.1 82742..83785(+) (vraS) [Staphylococcus aureus strain SR231]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTATTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCATACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCTCGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTTTCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGATAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1


Multiple sequence alignment