Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | M594_RS09785 | Genome accession | NZ_CP047883 |
| Coordinates | 2035213..2037645 (-) | Length | 810 a.a. |
| NCBI ID | WP_173876692.1 | Uniprot ID | - |
| Organism | Streptococcus mitis strain S022-V3-A4 | ||
| Function | degradation of ComW (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2030213..2042645
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| M594_RS09760 (M594_09805) | - | 2031176..2031859 (-) | 684 | WP_173876688.1 | hypothetical protein | - |
| M594_RS09765 (M594_09810) | - | 2032139..2032369 (+) | 231 | WP_023947307.1 | hypothetical protein | - |
| M594_RS09770 (M594_09815) | - | 2032443..2033216 (-) | 774 | WP_173876689.1 | NUDIX domain-containing protein | - |
| M594_RS09775 (M594_09820) | pnuC | 2033218..2033997 (-) | 780 | WP_173876690.1 | nicotinamide riboside transporter PnuC | - |
| M594_RS09780 (M594_09825) | - | 2034007..2035065 (-) | 1059 | WP_173876691.1 | AAA family ATPase | - |
| M594_RS09785 (M594_09830) | clpC | 2035213..2037645 (-) | 2433 | WP_173876692.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| M594_RS09790 (M594_09835) | - | 2037647..2038105 (-) | 459 | WP_173876693.1 | CtsR family transcriptional regulator | - |
| M594_RS09795 (M594_09840) | - | 2038224..2038952 (-) | 729 | WP_173876694.1 | ABC transporter ATP-binding protein | - |
| M594_RS09800 (M594_09845) | - | 2038952..2039959 (-) | 1008 | WP_004255331.1 | ABC transporter substrate-binding protein | - |
| M594_RS09805 (M594_09850) | - | 2039998..2040756 (-) | 759 | WP_162199275.1 | ABC transporter permease | - |
| M594_RS09810 (M594_09855) | - | 2040719..2041009 (-) | 291 | WP_173876695.1 | thiamine-binding protein | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90161.90 Da Isoelectric Point: 5.7581
>NTDB_id=418285 M594_RS09785 WP_173876692.1 2035213..2037645(-) (clpC) [Streptococcus mitis strain S022-V3-A4]
MNYSKALNECIESAYMVAGHFGARYLESWHLLIAMSNHSYSVAGATLNDYPYEMDRLEEVALELTETDYSQDETFTELPF
SHRLQVLFDEAEYVASVVHAKVLGTEHLLYAILHDGNALATRILERAGFSYEDKKDQVKIAALRRNLEERAGWTREDLKA
LRQRHRTVADKQNSMANMMGMPQTPSGGLEDYTHDLTEQARSGKLEPVIGRDKEISRMIQILSRKTKNNPVLVGDAGVGK
TALALGLAQRIASGDVPVEMAKMRVLELDLMNVVAGTRFRGDFEERMNNIIKDIEEDGQVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVTIEEPSVADSMVILQGLKVTYEKHHRVQITDEAVET
AVKMAHRYLTSRHLPDSAIDLLDEAAATVQNKAKHVTADDSGLSPADKALMDGKWKQAAQLIAKEEEVPVYKDLVTESDI
LTTLSRLSGIPVQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAK
ALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDD
GVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSS
DHMQEVVKIMVKPLVASLAEKGIDLKLQASALKLLANQGYDPEMGARPLRRTLQTEVEDKLAELLLKGELEAGSTLKIGV
KAGQLKFDIA
MNYSKALNECIESAYMVAGHFGARYLESWHLLIAMSNHSYSVAGATLNDYPYEMDRLEEVALELTETDYSQDETFTELPF
SHRLQVLFDEAEYVASVVHAKVLGTEHLLYAILHDGNALATRILERAGFSYEDKKDQVKIAALRRNLEERAGWTREDLKA
LRQRHRTVADKQNSMANMMGMPQTPSGGLEDYTHDLTEQARSGKLEPVIGRDKEISRMIQILSRKTKNNPVLVGDAGVGK
TALALGLAQRIASGDVPVEMAKMRVLELDLMNVVAGTRFRGDFEERMNNIIKDIEEDGQVILFIDELHTIMGSGSGIDST
LDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVTIEEPSVADSMVILQGLKVTYEKHHRVQITDEAVET
AVKMAHRYLTSRHLPDSAIDLLDEAAATVQNKAKHVTADDSGLSPADKALMDGKWKQAAQLIAKEEEVPVYKDLVTESDI
LTTLSRLSGIPVQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAK
ALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDD
GVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSS
DHMQEVVKIMVKPLVASLAEKGIDLKLQASALKLLANQGYDPEMGARPLRRTLQTEVEDKLAELLLKGELEAGSTLKIGV
KAGQLKFDIA
Nucleotide
Download Length: 2433 bp
>NTDB_id=418285 M594_RS09785 WP_173876692.1 2035213..2037645(-) (clpC) [Streptococcus mitis strain S022-V3-A4]
ATGAACTATTCAAAAGCGTTGAATGAATGTATCGAAAGTGCCTACATGGTTGCTGGCCATTTTGGAGCTCGTTATCTAGA
GTCTTGGCATTTGTTGATTGCCATGTCCAATCACAGTTATAGTGTGGCAGGGGCGACTTTAAATGATTATCCATATGAGA
TGGACCGTTTAGAAGAGGTGGCTTTGGAACTGACTGAAACAGACTATAGCCAGGATGAAACTTTTACGGAATTGCCGTTT
TCCCATCGTTTGCAGGTTCTTTTTGACGAAGCAGAGTATGTAGCGTCAGTGGTCCATGCTAAGGTGCTAGGGACAGAGCA
CCTCCTTTATGCGATTTTGCATGATGGCAATGCCTTGGCGACTCGTATCTTGGAGAGGGCTGGTTTTTCTTATGAAGACA
AGAAAGATCAGGTCAAGATTGCTGCCCTTCGTCGAAATTTAGAAGAACGTGCAGGTTGGACTCGTGAAGACCTCAAGGCT
TTACGTCAACGTCATCGTACAGTAGCTGACAAGCAAAATTCTATGGCCAATATGATGGGCATGCCGCAGACTCCGAGCGG
TGGTCTCGAGGACTATACGCATGATTTGACAGAGCAAGCGCGTTCTGGCAAGTTAGAACCAGTCATCGGTCGGGACAAGG
AAATCTCGCGTATGATTCAAATATTGAGTCGGAAGACAAAGAATAATCCTGTCTTGGTTGGAGATGCTGGTGTCGGGAAA
ACTGCTCTGGCGCTTGGTCTTGCCCAGCGAATTGCTAGTGGGGATGTACCTGTGGAAATGGCTAAGATGCGCGTGTTAGA
GCTGGATTTGATGAATGTCGTTGCAGGGACACGTTTCCGTGGTGACTTTGAAGAACGCATGAACAATATCATCAAGGATA
TTGAGGAAGATGGGCAAGTCATCCTCTTTATCGATGAACTTCATACCATCATGGGTTCTGGGAGTGGAATTGATTCGACT
CTGGATGCGGCCAATATCTTGAAACCAGCCTTGGCGCGTGGAACTTTGAGAACGGTTGGTGCGACCACTCAGGAAGAATA
CCAAAAACACATCGAAAAAGATGCGGCCCTTTCTCGTCGATTCGCCAAAGTGACGATCGAAGAGCCAAGTGTGGCCGACA
GTATGGTCATTTTGCAAGGTTTGAAGGTGACTTATGAGAAACATCACCGTGTGCAAATCACAGATGAAGCGGTTGAAACA
GCTGTCAAGATGGCCCATCGTTACTTGACTAGCCGTCACTTGCCAGATTCTGCTATTGACCTCTTAGATGAAGCAGCAGC
AACAGTGCAAAATAAGGCTAAGCATGTAACAGCAGATGATTCTGGCTTAAGTCCAGCTGACAAGGCCTTGATGGATGGCA
AGTGGAAACAGGCAGCCCAGCTAATCGCAAAAGAAGAGGAAGTGCCTGTCTATAAAGACTTGGTGACAGAGTCTGATATT
TTGACTACCTTGAGTCGCTTGTCAGGTATTCCAGTCCAAAAACTGACCCAGACTGATGCTAAAAAATATCTGAATCTGGA
AGCTGAATTGCACAAACGTGTCATCGGTCAAGATCAAGCAGTTTCAAGCATTAGCCGTGCCATTCGCCGCAACCAGTCAG
GGATTCGCAGTCACAAGCGTCCGATTGGTTCCTTTATGTTCCTAGGGCCTACAGGTGTCGGTAAGACCGAATTGGCCAAG
GCTCTGGCAGAAGTTCTTTTTGACGACGAATCAGCTCTTATCCGCTTTGATATGAGTGAGTATATGGAGAAATTCGCAGC
CAGCCGTCTCAACGGAGCTCCTCCGGGTTATGTGGGTTATGAAGAAGGTGGGGAGTTGACCGAGAAAGTTCGCAACAAAC
CATACTCTGTTCTCCTCTTTGACGAGGTAGAGAAGGCCCACCCAGACATCTTTAATGTTCTCTTGCAGGTCTTGGATGAT
GGGGTCTTAACAGATAGCAAGGGGCGCAAGGTTGACTTTTCAAATACCATTATTATCATGACGTCAAACCTTGGTGCGAC
AGCCCTTCGTGATGACAAGACTGTCGGATTTGGAGCTAAGGACATTCGTTTTGACCAGGAAAATATGGAAAAACGCATGT
TTGAAGAGCTGAAAAAAGCTTATAGGCCGGAGTTTATCAACCGTATTGATGAAAAGGTGGTCTTCCATAGCCTGTCTAGC
GACCATATGCAGGAAGTGGTGAAAATTATGGTTAAACCTTTAGTGGCAAGTTTGGCTGAAAAAGGTATTGACTTGAAATT
ACAAGCTTCCGCACTGAAATTGTTGGCCAATCAAGGATATGACCCAGAGATGGGAGCTCGTCCACTTCGCAGAACCCTGC
AAACAGAAGTGGAAGACAAGTTGGCAGAACTTCTTCTCAAGGGAGAATTAGAGGCAGGCAGCACACTTAAGATTGGTGTT
AAAGCAGGCCAGTTAAAATTTGATATTGCATAA
ATGAACTATTCAAAAGCGTTGAATGAATGTATCGAAAGTGCCTACATGGTTGCTGGCCATTTTGGAGCTCGTTATCTAGA
GTCTTGGCATTTGTTGATTGCCATGTCCAATCACAGTTATAGTGTGGCAGGGGCGACTTTAAATGATTATCCATATGAGA
TGGACCGTTTAGAAGAGGTGGCTTTGGAACTGACTGAAACAGACTATAGCCAGGATGAAACTTTTACGGAATTGCCGTTT
TCCCATCGTTTGCAGGTTCTTTTTGACGAAGCAGAGTATGTAGCGTCAGTGGTCCATGCTAAGGTGCTAGGGACAGAGCA
CCTCCTTTATGCGATTTTGCATGATGGCAATGCCTTGGCGACTCGTATCTTGGAGAGGGCTGGTTTTTCTTATGAAGACA
AGAAAGATCAGGTCAAGATTGCTGCCCTTCGTCGAAATTTAGAAGAACGTGCAGGTTGGACTCGTGAAGACCTCAAGGCT
TTACGTCAACGTCATCGTACAGTAGCTGACAAGCAAAATTCTATGGCCAATATGATGGGCATGCCGCAGACTCCGAGCGG
TGGTCTCGAGGACTATACGCATGATTTGACAGAGCAAGCGCGTTCTGGCAAGTTAGAACCAGTCATCGGTCGGGACAAGG
AAATCTCGCGTATGATTCAAATATTGAGTCGGAAGACAAAGAATAATCCTGTCTTGGTTGGAGATGCTGGTGTCGGGAAA
ACTGCTCTGGCGCTTGGTCTTGCCCAGCGAATTGCTAGTGGGGATGTACCTGTGGAAATGGCTAAGATGCGCGTGTTAGA
GCTGGATTTGATGAATGTCGTTGCAGGGACACGTTTCCGTGGTGACTTTGAAGAACGCATGAACAATATCATCAAGGATA
TTGAGGAAGATGGGCAAGTCATCCTCTTTATCGATGAACTTCATACCATCATGGGTTCTGGGAGTGGAATTGATTCGACT
CTGGATGCGGCCAATATCTTGAAACCAGCCTTGGCGCGTGGAACTTTGAGAACGGTTGGTGCGACCACTCAGGAAGAATA
CCAAAAACACATCGAAAAAGATGCGGCCCTTTCTCGTCGATTCGCCAAAGTGACGATCGAAGAGCCAAGTGTGGCCGACA
GTATGGTCATTTTGCAAGGTTTGAAGGTGACTTATGAGAAACATCACCGTGTGCAAATCACAGATGAAGCGGTTGAAACA
GCTGTCAAGATGGCCCATCGTTACTTGACTAGCCGTCACTTGCCAGATTCTGCTATTGACCTCTTAGATGAAGCAGCAGC
AACAGTGCAAAATAAGGCTAAGCATGTAACAGCAGATGATTCTGGCTTAAGTCCAGCTGACAAGGCCTTGATGGATGGCA
AGTGGAAACAGGCAGCCCAGCTAATCGCAAAAGAAGAGGAAGTGCCTGTCTATAAAGACTTGGTGACAGAGTCTGATATT
TTGACTACCTTGAGTCGCTTGTCAGGTATTCCAGTCCAAAAACTGACCCAGACTGATGCTAAAAAATATCTGAATCTGGA
AGCTGAATTGCACAAACGTGTCATCGGTCAAGATCAAGCAGTTTCAAGCATTAGCCGTGCCATTCGCCGCAACCAGTCAG
GGATTCGCAGTCACAAGCGTCCGATTGGTTCCTTTATGTTCCTAGGGCCTACAGGTGTCGGTAAGACCGAATTGGCCAAG
GCTCTGGCAGAAGTTCTTTTTGACGACGAATCAGCTCTTATCCGCTTTGATATGAGTGAGTATATGGAGAAATTCGCAGC
CAGCCGTCTCAACGGAGCTCCTCCGGGTTATGTGGGTTATGAAGAAGGTGGGGAGTTGACCGAGAAAGTTCGCAACAAAC
CATACTCTGTTCTCCTCTTTGACGAGGTAGAGAAGGCCCACCCAGACATCTTTAATGTTCTCTTGCAGGTCTTGGATGAT
GGGGTCTTAACAGATAGCAAGGGGCGCAAGGTTGACTTTTCAAATACCATTATTATCATGACGTCAAACCTTGGTGCGAC
AGCCCTTCGTGATGACAAGACTGTCGGATTTGGAGCTAAGGACATTCGTTTTGACCAGGAAAATATGGAAAAACGCATGT
TTGAAGAGCTGAAAAAAGCTTATAGGCCGGAGTTTATCAACCGTATTGATGAAAAGGTGGTCTTCCATAGCCTGTCTAGC
GACCATATGCAGGAAGTGGTGAAAATTATGGTTAAACCTTTAGTGGCAAGTTTGGCTGAAAAAGGTATTGACTTGAAATT
ACAAGCTTCCGCACTGAAATTGTTGGCCAATCAAGGATATGACCCAGAGATGGGAGCTCGTCCACTTCGCAGAACCCTGC
AAACAGAAGTGGAAGACAAGTTGGCAGAACTTCTTCTCAAGGGAGAATTAGAGGCAGGCAGCACACTTAAGATTGGTGTT
AAAGCAGGCCAGTTAAAATTTGATATTGCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus pneumoniae Rx1 |
98.642 |
100 |
0.986 |
| clpC | Streptococcus pneumoniae D39 |
98.642 |
100 |
0.986 |
| clpC | Streptococcus pneumoniae TIGR4 |
98.642 |
100 |
0.986 |
| clpC | Streptococcus mutans UA159 |
66.79 |
100 |
0.67 |
| clpC | Streptococcus thermophilus LMD-9 |
65.848 |
100 |
0.662 |
| clpC | Streptococcus thermophilus LMG 18311 |
65.725 |
100 |
0.66 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.975 |
100 |
0.501 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
45.241 |
99.877 |
0.452 |
| clpE | Streptococcus mutans UA159 |
48.674 |
79.136 |
0.385 |
| clpE | Streptococcus pneumoniae Rx1 |
46.835 |
78.025 |
0.365 |
| clpE | Streptococcus pneumoniae D39 |
46.835 |
78.025 |
0.365 |
| clpE | Streptococcus pneumoniae R6 |
46.835 |
78.025 |
0.365 |
| clpE | Streptococcus pneumoniae TIGR4 |
46.835 |
78.025 |
0.365 |