Detailed information NTG0418086

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: H9198_RS03975
• Genome accession: NZ_CP060938
• Coordinates: 833721..834704 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain EC11
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 828721..839704

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H9198_RS03960 (H9198_03905)	dppA	829864..831471 (+)	1608	WP_070749888.1	dipeptide ABC transporter substrate-binding protein DppA	-
H9198_RS24715	-	831505..831615 (-)	111	Protein_760	hypothetical protein	-
H9198_RS03965 (H9198_03915)	dppB	831779..832798 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
H9198_RS03970 (H9198_03920)	dppC	832808..833710 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
H9198_RS03975 (H9198_03925)	amiE	833721..834704 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
H9198_RS03980 (H9198_03930)	dppF	834701..835705 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
H9198_RS03985 (H9198_03935)	yhjV	835735..837006 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
H9198_RS03990 (H9198_03940)	ldrD	837482..837589 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
H9198_RS03995 (H9198_03945)	bcsG	837676..839355 (-)	1680	WP_000191549.1	cellulose biosynthesis protein BcsG	-
H9198_RS04000 (H9198_03950)	bcsF	839352..839543 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=418086 H9198_RS03975 WP_001196486.1 833721..834704(+) (amiE) [Escherichia coli strain EC11]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=418086 H9198_RS03975 WP_001196486.1 833721..834704(+) (amiE) [Escherichia coli strain EC11]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404