Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrR   Type   Regulator
Locus tag   SALIVB_RS02145 Genome accession   NC_015760
Coordinates   404255..404698 (+) Length   147 a.a.
NCBI ID   WP_002885568.1    Uniprot ID   A0A0A1DW04
Organism   Streptococcus salivarius CCHSS3     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 399255..409698
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SALIVB_RS02130 (SALIVB_0424) gdhA 400327..401679 (+) 1353 WP_002885547.1 NADP-specific glutamate dehydrogenase -
  SALIVB_RS02135 (SALIVB_0425) - 401960..403501 (+) 1542 WP_231844795.1 YfhO family protein -
  SALIVB_RS02140 (SALIVB_0426) - 403659..404069 (+) 411 WP_013990127.1 peptide deformylase -
  SALIVB_RS02145 (SALIVB_0427) rcrR 404255..404698 (+) 444 WP_002885568.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  SALIVB_RS02150 (SALIVB_0428) rcrP 404702..406516 (+) 1815 WP_013990129.1 ABC transporter ATP-binding protein Regulator
  SALIVB_RS02155 (SALIVB_0429) rcrQ 406506..408284 (+) 1779 WP_013990130.1 ABC transporter ATP-binding protein Regulator
  SALIVB_RS02160 (SALIVB_0430) - 408392..409015 (+) 624 WP_013990131.1 GNAT family N-acetyltransferase -

Sequence

Protein


Download         Length: 147 a.a.        Molecular weight: 17181.67 Da        Isoelectric Point: 9.3639

>NTDB_id=41806 SALIVB_RS02145 WP_002885568.1 404255..404698(+) (rcrR) [Streptococcus salivarius CCHSS3]
MHGKDTFSEFREFINTMESRVQELGKVHGVEHLAGPQGFAVKYLSDNQDKEIFIKDIEKRLCISKSVASNLVKRMEKNGF
VELVTSDKDKRYKYVHLTDLGKKKARDVKHFREAIHEQLLEGISKEDAETAFRVFHQIRMNLEKNKE

Nucleotide


Download         Length: 444 bp        

>NTDB_id=41806 SALIVB_RS02145 WP_002885568.1 404255..404698(+) (rcrR) [Streptococcus salivarius CCHSS3]
ATGCATGGAAAAGATACTTTTAGTGAATTCAGAGAATTCATCAATACTATGGAATCTCGCGTGCAAGAGTTAGGAAAGGT
CCATGGGGTTGAGCATTTAGCTGGCCCACAAGGATTTGCCGTCAAGTATTTGTCTGATAATCAAGATAAGGAAATTTTTA
TCAAGGACATTGAAAAAAGACTATGTATTTCTAAATCAGTGGCTAGTAATTTGGTCAAACGAATGGAAAAAAATGGTTTT
GTTGAGTTGGTGACATCGGACAAGGATAAACGCTACAAGTATGTTCATCTGACAGACTTAGGTAAAAAGAAAGCTCGAGA
TGTCAAACATTTTCGAGAGGCCATCCATGAACAGCTGTTAGAAGGTATTTCTAAAGAAGATGCTGAAACAGCCTTTCGTG
TCTTTCACCAAATTCGTATGAATTTAGAAAAAAATAAGGAGTAA

Domains

Predicted by InterproScan.

MarR family (MarR_2)

(37-91)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A1DW04

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrR Streptococcus mutans UA159

58.156

95.918

0.558

Multiple sequence alignment