Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   E3S85_RS10465 Genome accession   NZ_CP047839
Coordinates   2154154..2155041 (+) Length   295 a.a.
NCBI ID   WP_000143418.1    Uniprot ID   -
Organism   Staphylococcus aureus strain UP_678     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2149154..2160041
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3S85_RS10435 (E3S85_10435) - 2149886..2150647 (+) 762 WP_000323448.1 alpha/beta hydrolase -
  E3S85_RS10440 (E3S85_10440) - 2150892..2151347 (+) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  E3S85_RS14170 - 2151469..2151570 (+) 102 WP_000731972.1 SE2200 family small protein -
  E3S85_RS10450 (E3S85_10450) - 2151630..2153054 (-) 1425 WP_160176080.1 alkaline phosphatase -
  E3S85_RS10455 (E3S85_10455) - 2153252..2153452 (+) 201 WP_000604727.1 hypothetical protein -
  E3S85_RS10460 (E3S85_10460) braR 2153478..2154143 (+) 666 WP_000697879.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  E3S85_RS10465 (E3S85_10465) braS 2154154..2155041 (+) 888 WP_000143418.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  E3S85_RS10470 (E3S85_10470) - 2155149..2155904 (+) 756 WP_000923764.1 ABC transporter ATP-binding protein -
  E3S85_RS10475 (E3S85_10475) - 2155901..2157901 (+) 2001 WP_000776744.1 ABC transporter permease -
  E3S85_RS10480 (E3S85_10480) - 2158567..2158680 (+) 114 WP_014937089.1 hypothetical protein -
  E3S85_RS10485 (E3S85_10485) - 2159062..2159322 (+) 261 WP_001791293.1 hypothetical protein -
  E3S85_RS10490 (E3S85_10490) - 2159332..2159829 (+) 498 WP_001065267.1 glutathione peroxidase -
  E3S85_RS10495 (E3S85_10495) - 2159937..2160029 (-) 93 WP_031774855.1 hypothetical protein -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34105.41 Da        Isoelectric Point: 5.8962

>NTDB_id=417571 E3S85_RS10465 WP_000143418.1 2154154..2155041(+) (braS) [Staphylococcus aureus strain UP_678]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLENALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQFNQLYVKDNGIGISEADLPK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=417571 E3S85_RS10465 WP_000143418.1 2154154..2155041(+) (braS) [Staphylococcus aureus strain UP_678]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAATTTAGAAAATGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTGAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAACAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATTCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGCCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGGCAAAGTAACTCAAGTGGGATTGGTTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

98.983

100

0.99


Multiple sequence alignment