Detailed information NTG0417423

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: H9206_RS00925
• Genome accession: NZ_CP060899
• Coordinates: 193867..194850 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196496.1
• Uniprot ID: Q3YVS2
• Organism: Escherichia coli strain EC21
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 188867..199850

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H9206_RS00910 (H9206_00885)	dppA	190167..191774 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
H9206_RS00915 (H9206_00890)	dppB	191925..192944 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
H9206_RS00920 (H9206_00895)	dppC	192954..193856 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
H9206_RS00925 (H9206_00900)	amiE	193867..194850 (+)	984	WP_001196496.1	dipeptide ABC transporter ATP-binding protein	Regulator
H9206_RS00930 (H9206_00905)	dppF	194847..195851 (+)	1005	WP_000107035.1	dipeptide ABC transporter ATP-binding subunit DppF	-
H9206_RS00935 (H9206_00910)	yhjV	195881..197152 (-)	1272	WP_001307456.1	aromatic amino acid transport family protein	-
H9206_RS00940 (H9206_00915)	-	197628..197735 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
H9206_RS00945 (H9206_00920)	-	198111..198218 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
H9206_RS00950 (H9206_00925)	-	198594..198701 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35814.38 Da
• Isoelectric Point: 6.7584

>NTDB_id=417423 H9206_RS00925 WP_001196496.1 193867..194850(+) (amiE) [Escherichia coli strain EC21]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=417423 H9206_RS00925 WP_001196496.1 193867..194850(+) (amiE) [Escherichia coli strain EC21]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTTGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCCCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAACTGGTGTTTAACGGTCAGGATTTGCAGCGTATCTCGGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCGCATGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCATCGTTGCCTGGCGTCGTTCCCGGCAAGTACGATCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCCACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: Q3YVS2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401