Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   E3S92_RS00485 Genome accession   NZ_CP047833
Coordinates   90194..91237 (+) Length   347 a.a.
NCBI ID   WP_001017131.1    Uniprot ID   A0A0D1IMN4
Organism   Staphylococcus aureus strain UP_926     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 85194..96237
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3S92_RS00455 (E3S92_00455) - 85762..85871 (+) 110 Protein_93 hypothetical protein -
  E3S92_RS00460 (E3S92_00460) - 85900..86313 (+) 414 WP_001622129.1 hypothetical protein -
  E3S92_RS00465 (E3S92_00465) - 86491..87477 (-) 987 WP_000999713.1 FUSC family protein -
  E3S92_RS00470 (E3S92_00470) map 88120..88878 (+) 759 WP_000636137.1 type I methionyl aminopeptidase -
  E3S92_RS00475 (E3S92_00475) - 89095..89481 (+) 387 WP_001110184.1 hypothetical protein -
  E3S92_RS00480 (E3S92_00480) liaF 89496..90197 (+) 702 WP_160190094.1 cell wall-active antibiotics response protein LiaF -
  E3S92_RS00485 (E3S92_00485) vraS 90194..91237 (+) 1044 WP_001017131.1 sensor histidine kinase Regulator
  E3S92_RS00490 (E3S92_00490) vraR 91227..91856 (+) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  E3S92_RS00495 (E3S92_00495) - 91969..93186 (-) 1218 WP_000037083.1 YihY/virulence factor BrkB family protein -
  E3S92_RS00500 (E3S92_00500) - 93464..93739 (-) 276 WP_000428172.1 YtxH domain-containing protein -
  E3S92_RS00505 (E3S92_00505) - 93746..94210 (-) 465 WP_000228668.1 low molecular weight protein-tyrosine-phosphatase -
  E3S92_RS00510 (E3S92_00510) - 94357..94557 (+) 201 WP_000180459.1 DUF1128 family protein -
  E3S92_RS00515 (E3S92_00515) - 94626..95816 (+) 1191 WP_411896787.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40044.52 Da        Isoelectric Point: 6.0577

>NTDB_id=417409 E3S92_RS00485 WP_001017131.1 90194..91237(+) (vraS) [Staphylococcus aureus strain UP_926]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDEKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=417409 E3S92_RS00485 WP_001017131.1 90194..91237(+) (vraS) [Staphylococcus aureus strain UP_926]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACACAAATATTCGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCACGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTATCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTACCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTCGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGAAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0D1IMN4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

100

100

1


Multiple sequence alignment