Detailed information NTG0417178

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: H9209_RS00860
• Genome accession: NZ_CP060880
• Coordinates: 185758..186741 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain EC26
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 180758..191741

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H9209_RS00845 (H9209_00825)	dppA	181901..183508 (+)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-
H9209_RS24840	-	183542..183652 (-)	111	Protein_166	hypothetical protein	-
H9209_RS00850 (H9209_00830)	dppB	183816..184835 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
H9209_RS00855 (H9209_00835)	dppC	184845..185747 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
H9209_RS00860 (H9209_00840)	amiE	185758..186741 (+)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
H9209_RS00865 (H9209_00845)	dppF	186738..187742 (+)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
H9209_RS00870 (H9209_00850)	yhjV	187772..189043 (-)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
H9209_RS00875 (H9209_00855)	ldrD	189519..189626 (+)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
H9209_RS00880 (H9209_00860)	bcsG	189713..191392 (-)	1680	WP_000191619.1	cellulose biosynthesis protein BcsG	-
H9209_RS00885 (H9209_00865)	bcsF	191389..191580 (-)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=417178 H9209_RS00860 WP_001196486.1 185758..186741(+) (amiE) [Escherichia coli strain EC26]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=417178 H9209_RS00860 WP_001196486.1 185758..186741(+) (amiE) [Escherichia coli strain EC26]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404