Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   E3T15_RS09960 Genome accession   NZ_CP047807
Coordinates   2035750..2036415 (+) Length   221 a.a.
NCBI ID   WP_000697877.1    Uniprot ID   A0A0D1JN68
Organism   Staphylococcus aureus strain UP_1612     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2030750..2041415
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3T15_RS09935 (E3T15_09935) - 2032158..2032919 (+) 762 WP_000323441.1 alpha/beta hydrolase -
  E3T15_RS09940 (E3T15_09940) - 2033164..2033619 (+) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  E3T15_RS13745 - 2033741..2033842 (+) 102 WP_000731976.1 SE2200 family small protein -
  E3T15_RS09950 (E3T15_09950) - 2033902..2035326 (-) 1425 WP_047928661.1 alkaline phosphatase -
  E3T15_RS09955 (E3T15_09955) - 2035524..2035724 (+) 201 WP_000604727.1 hypothetical protein -
  E3T15_RS09960 (E3T15_09960) braR 2035750..2036415 (+) 666 WP_000697877.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  E3T15_RS09965 (E3T15_09965) braS 2036426..2037313 (+) 888 WP_000143426.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  E3T15_RS09970 (E3T15_09970) - 2037422..2038177 (+) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  E3T15_RS09975 (E3T15_09975) - 2038174..2040174 (+) 2001 WP_000776753.1 ABC transporter permease -
  E3T15_RS09980 (E3T15_09980) - 2040833..2040946 (+) 114 WP_072384844.1 hypothetical protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25415.49 Da        Isoelectric Point: 4.7961

>NTDB_id=416987 E3T15_RS09960 WP_000697877.1 2035750..2036415(+) (braR) [Staphylococcus aureus strain UP_1612]
MKILIVEDDFVIAESLASELKKWNYGVIVVEQFDDILSIFNQHQPQLVLLDINLPTLNGFHWCQEIRKTSNVPIIFISSR
IDNMDQIMAIQMGGDDFIEKPFNLSLTIAKIQALLRRTYDLSVANDSLTVKGCTLILDEAKVVYQEQNIQLSLTELQILK
LLFQNEDKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLNTIGVNDFIITKKNVGYKV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=416987 E3T15_RS09960 WP_000697877.1 2035750..2036415(+) (braR) [Staphylococcus aureus strain UP_1612]
ATGAAAATATTAATTGTTGAAGATGATTTTGTTATAGCAGAAAGTTTAGCATCTGAACTTAAAAAATGGAATTACGGTGT
TATTGTCGTTGAACAATTTGATGATATACTGTCTATCTTTAACCAACATCAACCTCAGCTTGTATTGCTAGATATTAATT
TGCCAACGTTAAATGGTTTTCATTGGTGTCAAGAAATCCGAAAAACATCTAATGTGCCAATTATATTTATTAGTTCCCGT
ATTGATAATATGGACCAAATTATGGCAATACAAATGGGGGGAGATGATTTTATCGAAAAACCATTTAACTTGTCATTAAC
GATTGCCAAAATTCAAGCATTATTGAGACGAACTTATGACTTGTCAGTAGCTAATGATTCATTGACGGTTAAAGGTTGTA
CATTAATATTAGATGAAGCAAAAGTCGTGTATCAAGAACAAAACATACAGCTATCTTTGACTGAATTACAAATATTAAAG
TTATTATTTCAAAATGAAGATAAATATGTAAGTAGAACTGCTTTAATTGAAAAATGTTGGGAATCAGAAAACTTCATAGA
TGATAACACATTAGCTGTTAACATGACGCGCCTGCGTAAAAAATTAAATACTATTGGCGTTAATGATTTTATCATTACAA
AGAAAAATGTCGGATATAAAGTATAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0D1JN68

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

100

100

1

Multiple sequence alignment