Detailed information NTG0416836

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: H9445_RS19035
• Genome accession: NZ_CP060709
• Coordinates: 3865258..3866241 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain ST18
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3860258..3871241

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H9445_RS19010 (H9445_19010)	bcsF	3860419..3860610 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
H9445_RS19015 (H9445_19015)	bcsG	3860607..3862286 (+)	1680	WP_000191622.1	cellulose biosynthesis protein BcsG	-
H9445_RS19020 (H9445_19020)	ldrD	3862373..3862480 (-)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
H9445_RS19025 (H9445_19025)	yhjV	3862956..3864227 (+)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
H9445_RS19030 (H9445_19030)	dppF	3864257..3865261 (-)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
H9445_RS19035 (H9445_19035)	amiE	3865258..3866241 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
H9445_RS19040 (H9445_19040)	dppC	3866252..3867154 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
H9445_RS19045 (H9445_19045)	dppB	3867164..3868183 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
H9445_RS23975	-	3868347..3868457 (+)	111	Protein_3772	hypothetical protein	-
H9445_RS19050 (H9445_19050)	dppA	3868491..3870098 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=416836 H9445_RS19035 WP_001196486.1 3865258..3866241(-) (amiE) [Escherichia coli strain ST18]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=416836 H9445_RS19035 WP_001196486.1 3865258..3866241(-) (amiE) [Escherichia coli strain ST18]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404