Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | E3S81_RS02705 | Genome accession | NZ_CP047794 |
| Coordinates | 493386..493697 (+) | Length | 103 a.a. |
| NCBI ID | WP_000472256.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain UP_551 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 488386..498697
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3S81_RS02675 (E3S81_02675) | - | 489169..489372 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| E3S81_RS02680 (E3S81_02680) | - | 489369..490355 (+) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| E3S81_RS02685 (E3S81_02685) | - | 490355..490684 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| E3S81_RS02690 (E3S81_02690) | - | 490681..491304 (+) | 624 | WP_047213494.1 | MBL fold metallo-hydrolase | - |
| E3S81_RS02695 (E3S81_02695) | comGA | 491356..492330 (+) | 975 | WP_000697222.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| E3S81_RS02700 (E3S81_02700) | comGB | 492302..493372 (+) | 1071 | WP_000776413.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| E3S81_RS02705 (E3S81_02705) | comGC | 493386..493697 (+) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| E3S81_RS02710 (E3S81_02710) | comGD | 493675..494121 (+) | 447 | WP_072357807.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| E3S81_RS02715 (E3S81_02715) | comGE | 494108..494407 (+) | 300 | WP_000844415.1 | hypothetical protein | Machinery gene |
| E3S81_RS02720 (E3S81_02720) | comGF | 494325..494822 (+) | 498 | WP_001825340.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| E3S81_RS02725 (E3S81_02725) | - | 494919..495065 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| E3S81_RS02730 (E3S81_02730) | - | 495055..495579 (+) | 525 | WP_001015120.1 | shikimate kinase | - |
| E3S81_RS02735 (E3S81_02735) | gcvT | 495738..496829 (+) | 1092 | WP_000093354.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| E3S81_RS02740 (E3S81_02740) | gcvPA | 496849..498195 (+) | 1347 | WP_000019687.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 11315.36 Da Isoelectric Point: 8.5268
>NTDB_id=416460 E3S81_RS02705 WP_000472256.1 493386..493697(+) (comGC) [Staphylococcus aureus strain UP_551]
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN
MFKFLKKTQAFTLIEMLLVLLIISLLLILIIPNIAKQTAHIQSTGCNAQVKMVNSQIEAYALKHNRNPSSIEDLIADGFI
KEAQKTCKSGETITISNGEAVAN
Nucleotide
Download Length: 312 bp
>NTDB_id=416460 E3S81_RS02705 WP_000472256.1 493386..493697(+) (comGC) [Staphylococcus aureus strain UP_551]
ATGTTTAAATTTCTAAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
ATGTTTAAATTTCTAAAGAAAACTCAAGCGTTTACATTGATAGAGATGCTATTAGTGTTATTAATCATCAGTTTATTATT
AATTTTAATCATTCCAAATATTGCTAAACAAACTGCTCACATACAATCAACAGGTTGTAATGCACAGGTAAAAATGGTTA
ATAGTCAAATTGAAGCGTATGCATTGAAACATAATAGAAATCCATCGTCTATTGAAGACTTAATTGCAGATGGTTTTATA
AAAGAAGCACAAAAGACATGTAAATCAGGAGAGACAATAACAATTAGTAATGGAGAAGCAGTTGCAAATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Staphylococcus aureus MW2 |
100 |
100 |
1 |
| comGC | Staphylococcus aureus N315 |
100 |
100 |
1 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus pneumoniae D39 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus pneumoniae R6 |
46.078 |
99.029 |
0.456 |
| comGC/cglC | Streptococcus mitis SK321 |
51.163 |
83.495 |
0.427 |
| comGC/cglC | Streptococcus mitis NCTC 12261 |
51.163 |
83.495 |
0.427 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
42.857 |
95.146 |
0.408 |
| comYC | Streptococcus suis isolate S10 |
50 |
75.728 |
0.379 |
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
41.758 |
88.35 |
0.369 |
| comGC | Lactococcus lactis subsp. cremoris KW2 |
46.341 |
79.612 |
0.369 |