Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   NIT79A3_RS02300 Genome accession   NC_015731
Coordinates   504608..504994 (+) Length   128 a.a.
NCBI ID   WP_013964652.1    Uniprot ID   F8GID3
Organism   Nitrosomonas sp. Is79A3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 499608..509994
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NIT79A3_RS02280 (Nit79A3_0466) - 500193..500750 (+) 558 WP_013964648.1 thioredoxin family protein -
  NIT79A3_RS02285 (Nit79A3_0467) - 500753..501541 (+) 789 WP_013964649.1 inositol monophosphatase family protein -
  NIT79A3_RS02290 (Nit79A3_0468) trkA 501551..503002 (+) 1452 WP_013964650.1 Trk system potassium transporter TrkA -
  NIT79A3_RS02295 (Nit79A3_0469) - 503015..504472 (+) 1458 WP_013964651.1 potassium transporter TrkG -
  NIT79A3_RS02300 (Nit79A3_0470) pilG 504608..504994 (+) 387 WP_013964652.1 response regulator Regulator
  NIT79A3_RS02305 (Nit79A3_0471) - 505357..506166 (+) 810 WP_013964653.1 methane monooxygenase/ammonia monooxygenase subunit C -
  NIT79A3_RS02310 (Nit79A3_0472) - 506347..507171 (+) 825 WP_013964654.1 methane monooxygenase/ammonia monooxygenase subunit A -
  NIT79A3_RS02315 (Nit79A3_0473) - 507171..508433 (+) 1263 WP_013964655.1 methane monooxygenase/ammonia monooxygenase subunit B -
  NIT79A3_RS02320 (Nit79A3_0474) - 508603..509187 (+) 585 WP_013964656.1 hypothetical protein -
  NIT79A3_RS02325 (Nit79A3_0475) - 509254..509835 (+) 582 WP_013964657.1 hypothetical protein -

Sequence


Protein


Download         Length: 128 a.a.        Molecular weight: 14352.67 Da        Isoelectric Point: 4.6856

>NTDB_id=41642 NIT79A3_RS02300 WP_013964652.1 504608..504994(+) (pilG) [Nitrosomonas sp. Is79A3]
MDNAGALKGIKVMIIDDSNTIRRSAELFLRPSECEVILAEDGFEAMSKIVDNQPDIIFVDITMPRLDGYQACMLIKKNPI
YQSIPVIMLSSKDGLFDKARGRMSGSNDYLTKPFTAEDLLSIIRNYTL

Nucleotide


Download         Length: 387 bp        

>NTDB_id=41642 NIT79A3_RS02300 WP_013964652.1 504608..504994(+) (pilG) [Nitrosomonas sp. Is79A3]
ATGGATAATGCCGGTGCATTGAAAGGTATTAAAGTCATGATTATCGATGACAGCAATACGATCAGGAGAAGCGCTGAATT
ATTTTTGAGGCCATCGGAATGTGAAGTGATTCTTGCAGAAGACGGATTTGAAGCAATGTCTAAAATTGTTGATAACCAGC
CTGATATTATTTTTGTTGACATAACAATGCCGCGCTTGGATGGATATCAAGCTTGTATGTTGATTAAAAAAAACCCTATT
TATCAATCGATCCCGGTGATTATGTTATCCAGTAAAGATGGTCTTTTTGATAAAGCTCGAGGCAGAATGTCAGGTTCTAA
CGATTATCTGACTAAACCATTTACCGCTGAGGATTTATTGAGCATAATACGAAACTACACTTTGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB F8GID3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

65.289

94.531

0.617


Multiple sequence alignment