Detailed information    

insolico Bioinformatically predicted

Overview


Name   braS   Type   Regulator
Locus tag   E3S98_RS10280 Genome accession   NZ_CP047786
Coordinates   2122008..2122895 (+) Length   295 a.a.
NCBI ID   WP_160191665.1    Uniprot ID   -
Organism   Staphylococcus aureus strain UP_1150     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 2117008..2127895
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3S98_RS10250 (E3S98_10250) - 2117740..2118501 (+) 762 WP_045172621.1 alpha/beta hydrolase -
  E3S98_RS10255 (E3S98_10255) - 2118746..2119201 (+) 456 WP_000106185.1 MarR family winged helix-turn-helix transcriptional regulator -
  E3S98_RS14005 - 2119323..2119424 (+) 102 WP_000731972.1 SE2200 family small protein -
  E3S98_RS10265 (E3S98_10265) - 2119484..2120908 (-) 1425 WP_000953747.1 alkaline phosphatase -
  E3S98_RS10270 (E3S98_10270) - 2121106..2121306 (+) 201 WP_000604727.1 hypothetical protein -
  E3S98_RS10275 (E3S98_10275) braR 2121332..2121997 (+) 666 WP_160191663.1 nisin susceptibility-associated two-component system response regulator NsaR Regulator
  E3S98_RS10280 (E3S98_10280) braS 2122008..2122895 (+) 888 WP_160191665.1 nisin susceptibility-associated two-component system sensor histidine kinase NsaS Regulator
  E3S98_RS10285 (E3S98_10285) - 2123004..2123759 (+) 756 WP_000923760.1 ABC transporter ATP-binding protein -
  E3S98_RS10290 (E3S98_10290) - 2123756..2125756 (+) 2001 WP_000776753.1 ABC transporter permease -
  E3S98_RS10295 (E3S98_10295) - 2126415..2126528 (+) 114 WP_072384844.1 hypothetical protein -
  E3S98_RS10300 (E3S98_10300) - 2126910..2127170 (+) 261 WP_001791974.1 hypothetical protein -
  E3S98_RS10305 (E3S98_10305) - 2127180..2127677 (+) 498 WP_001065268.1 glutathione peroxidase -
  E3S98_RS10310 (E3S98_10310) - 2127785..2127877 (-) 93 WP_010956583.1 hypothetical protein -

Sequence


Protein


Download         Length: 295 a.a.        Molecular weight: 34022.28 Da        Isoelectric Point: 5.8962

>NTDB_id=416144 E3S98_RS10280 WP_160191665.1 2122008..2122895(+) (braS) [Staphylococcus aureus strain UP_1150]
MTFLKSITQEIAIVIVIFALFGLMFYLYHLPLEAYLLALGVILLLLLIFIGIKYLSFVKTISQQQQIENLETALYQLKNE
QIEYKNDVESYFLTWVHQMKTPITAAQLLLERDEPNVVNRVRQEVIQIDNYTSLALSYLKLLNETSDISVTKISINNIIR
PIIMKYSIQFIDQKTKIHYEPCHHEVLTDVRWTSLMIEQLINNALKYARGKDIWIEFDEQSNQLYVKDNGIGISEADLSK
IFDKGYSGYNGQRQSNSSGIGLFIVKQISTHTNHPVSVVSKQNEGTTFTIQFPDE

Nucleotide


Download         Length: 888 bp        

>NTDB_id=416144 E3S98_RS10280 WP_160191665.1 2122008..2122895(+) (braS) [Staphylococcus aureus strain UP_1150]
ATGACCTTTCTTAAAAGTATTACTCAGGAAATAGCAATAGTCATAGTTATTTTTGCTTTATTTGGCTTAATGTTTTACCT
GTATCATTTGCCATTAGAAGCATATTTACTAGCACTTGGCGTTATTTTATTATTATTACTCATATTCATAGGTATTAAAT
ATTTAAGTTTTGTAAAAACTATAAGCCAACAACAACAAATTGAAAACTTAGAAACTGCGTTGTATCAGCTTAAAAATGAA
CAAATTGAATATAAAAATGATGTAGAGAGCTACTTTTTAACATGGGTACATCAAATGAAAACACCCATTACTGCAGCACA
ACTGTTACTTGAAAGAGATGAGCCTAATGTTGTTAATCGTGTTCGTCAAGAGGTTATTCAAATTGATAACTATACAAGTT
TAGCACTTAGTTATTTAAAGTTATTAAATGAAACTTCTGATATTTCTGTCACTAAAATTTCGATTAATAATATCATTCGC
CCAATTATTATGAAATATTCAATACAGTTTATTGATCAAAAAACAAAAATCCATTATGAACCTTGTCATCACGAAGTATT
AACTGACGTTAGATGGACCTCTTTAATGATAGAACAATTAATAAATAATGCACTTAAGTATGCGAGAGGTAAAGATATAT
GGATTGAATTTGATGAGCAATCCAATCAATTATACGTAAAAGATAATGGTATCGGTATTAGTGAAGCGGACTTGTCTAAA
ATATTTGATAAGGGCTATTCAGGTTATAATGGCCAGCGTCAAAGTAACTCAAGTGGGATTGGCTTATTTATCGTAAAACA
AATTTCAACTCACACAAACCATCCTGTTTCAGTCGTATCTAAACAAAATGAGGGTACAACATTTACGATTCAATTTCCAG
ATGAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

99.322

100

0.993


Multiple sequence alignment