Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   E3S98_RS00460 Genome accession   NZ_CP047786
Coordinates   83440..84483 (+) Length   347 a.a.
NCBI ID   WP_160191546.1    Uniprot ID   -
Organism   Staphylococcus aureus strain UP_1150     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 78440..89483
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3S98_RS00430 (E3S98_00430) - 78925..79035 (+) 111 WP_001790257.1 hypothetical protein -
  E3S98_RS00435 (E3S98_00435) - 79064..79477 (+) 414 WP_001566709.1 hypothetical protein -
  E3S98_RS00440 (E3S98_00440) - 79908..80894 (-) 987 WP_000999713.1 FUSC family protein -
  E3S98_RS00445 (E3S98_00445) map 81366..82124 (+) 759 WP_000636142.1 type I methionyl aminopeptidase -
  E3S98_RS00450 (E3S98_00450) - 82341..82727 (+) 387 WP_001110179.1 hypothetical protein -
  E3S98_RS00455 (E3S98_00455) liaF 82742..83443 (+) 702 WP_000149064.1 cell wall-active antibiotics response protein LiaF -
  E3S98_RS00460 (E3S98_00460) vraS 83440..84483 (+) 1044 WP_160191546.1 sensor histidine kinase Regulator
  E3S98_RS00465 (E3S98_00465) vraR 84473..85102 (+) 630 WP_000153535.1 two-component system response regulator VraR Regulator
  E3S98_RS00470 (E3S98_00470) - 85214..86431 (-) 1218 WP_000037079.1 YihY/virulence factor BrkB family protein -
  E3S98_RS00475 (E3S98_00475) - 86709..86984 (-) 276 WP_000428172.1 YtxH domain-containing protein -
  E3S98_RS00480 (E3S98_00480) - 86991..87455 (-) 465 WP_000228666.1 low molecular weight protein-tyrosine-phosphatase -
  E3S98_RS00485 (E3S98_00485) - 87602..87802 (+) 201 WP_000180460.1 DUF1128 family protein -
  E3S98_RS00490 (E3S98_00490) - 87805..89061 (+) 1257 WP_078103502.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 39972.46 Da        Isoelectric Point: 6.2442

>NTDB_id=416109 E3S98_RS00460 WP_160191546.1 83440..84483(+) (vraS) [Staphylococcus aureus strain UP_1150]
MNHYIRTIGSMLILVYSMLAAFLFIDKVFVNIIYFQGMFYTQIFGIPVFLFLNLIIILLCIIVGSVLAYKINQQNDWIKT
QIERSMEGETVGINDQNIEIYSETLDLYHTLVPLNQELHKLRLKTQNLTNENYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKETKLEPPLDQQIPILEKMVQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVIDLQKKVPMKVVHEI
QDFKVPKGIEDHLFRITQEAISNTLRHSNGTKVTVELFNKDDYLLLRIQDNGKGFNVDGKLEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLNKEDSYDD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=416109 E3S98_RS00460 WP_160191546.1 83440..84483(+) (vraS) [Staphylococcus aureus strain UP_1150]
ATGAACCACTACATTAGAACAATTGGTTCAATGCTCATCTTAGTATATAGCATGCTAGCTGCATTTCTGTTCATCGATAA
AGTTTTTGTAAATATCATCTATTTTCAAGGTATGTTTTATACTCAAATATTTGGAATACCAGTCTTTTTATTTTTAAATC
TCATCATCATATTATTGTGTATTATTGTTGGTTCGGTACTCGCTTACAAAATCAATCAGCAAAATGATTGGATTAAGACG
CAAATTGAGCGTTCAATGGAAGGCGAAACAGTTGGCATTAATGATCAAAATATAGAAATATATAGTGAAACGTTAGATTT
ATACCATACACTCGTACCTTTAAATCAAGAATTGCATAAGTTGCGACTTAAAACTCAAAACTTAACCAATGAAAATTATA
ATATTAATGATGTGAAAGTTAAAAAGATTATTGAAGATGAACGTCAAAGACTAGCTCGAGAACTTCACGATTCTGTTAGT
CAGCAACTTTTTGCGGCAAGTATGATGCTTTCTGCTATCAAAGAAACGAAGTTAGAACCACCATTAGACCAACAAATTCC
GATTTTAGAGAAAATGGTTCAAGATTCGCAGTTAGAAATGCGTGCTTTGCTGTTACATTTAAGACCGCTTGGTTTAAAAG
ACAAATCTTTAGGTGAGGGTATTAAAGATTTAGTTATTGATTTACAAAAAAAAGTGCCAATGAAAGTTGTGCATGAAATA
CAAGATTTTAAAGTGCCTAAAGGTATTGAAGATCATTTGTTCAGAATTACACAGGAAGCAATTTCGAATACATTGCGTCA
TTCAAACGGTACAAAAGTGACAGTAGAATTGTTTAATAAAGACGATTATTTATTGTTGAGAATTCAAGACAATGGTAAAG
GTTTTAATGTTGATGGAAAATTAGAACAAAGTTATGGACTTAAAAATATGCGTGAAAGAGCTTTGGAAATTGGTGCAACG
TTCCATATTGTATCATTGCCAGATTCAGGTACACGTATCGAGGTGAAAGCACCTTTAAATAAGGAGGATTCGTATGACGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

99.712

100

0.997


Multiple sequence alignment