Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | E3S99_RS02620 | Genome accession | NZ_CP047785 |
| Coordinates | 469792..470091 (+) | Length | 99 a.a. |
| NCBI ID | WP_195758580.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain UP_1186 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 464792..475091
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3S99_RS02580 (E3S99_02580) | - | 464853..465056 (+) | 204 | WP_000087561.1 | YqgQ family protein | - |
| E3S99_RS02585 (E3S99_02585) | - | 465053..466039 (+) | 987 | WP_000161307.1 | ROK family glucokinase | - |
| E3S99_RS02590 (E3S99_02590) | - | 466039..466368 (+) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| E3S99_RS02595 (E3S99_02595) | - | 466365..466988 (+) | 624 | WP_001223009.1 | MBL fold metallo-hydrolase | - |
| E3S99_RS02600 (E3S99_02600) | comGA | 467040..468014 (+) | 975 | Protein_482 | competence type IV pilus ATPase ComGA | - |
| E3S99_RS02605 (E3S99_02605) | comGB | 467986..469056 (+) | 1071 | WP_000776409.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| E3S99_RS02610 (E3S99_02610) | comGC | 469070..469381 (+) | 312 | WP_000472255.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| E3S99_RS02615 (E3S99_02615) | comGD | 469359..469805 (+) | 447 | WP_160199701.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| E3S99_RS02620 (E3S99_02620) | comGE | 469792..470091 (+) | 300 | WP_195758580.1 | competence protein ComGE | Machinery gene |
| E3S99_RS02625 (E3S99_02625) | comGF | 470009..470506 (+) | 498 | WP_001796472.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| E3S99_RS02630 (E3S99_02630) | - | 470603..470749 (+) | 147 | WP_001789879.1 | hypothetical protein | - |
| E3S99_RS02635 (E3S99_02635) | - | 470739..471263 (+) | 525 | WP_001015120.1 | shikimate kinase | - |
| E3S99_RS02640 (E3S99_02640) | gcvT | 471422..472513 (+) | 1092 | WP_000093344.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| E3S99_RS02645 (E3S99_02645) | gcvPA | 472533..473879 (+) | 1347 | WP_000019698.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11119.28 Da Isoelectric Point: 9.9215
>NTDB_id=416083 E3S99_RS02620 WP_195758580.1 469792..470091(+) (comGE) [Staphylococcus aureus strain UP_1186]
MKIYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKIYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=416083 E3S99_RS02620 WP_195758580.1 469792..470091(+) (comGE) [Staphylococcus aureus strain UP_1186]
ATGAAAATCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATATGTGCCATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAATCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAATATGATATTAAGCAAAGTGACCAA
CAAATATGTGCCATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
85.965 |
100 |
0.99 |
| comGE | Staphylococcus aureus N315 |
97.98 |
100 |
0.98 |