Detailed information    

insolico Bioinformatically predicted

Overview


Name   comK/comK1   Type   Regulator
Locus tag   E3T00_RS04630 Genome accession   NZ_CP047784
Coordinates   965165..965734 (-) Length   189 a.a.
NCBI ID   WP_000287265.1    Uniprot ID   A0A7U7EXU5
Organism   Staphylococcus aureus strain UP_1209     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 960165..970734
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3T00_RS04610 (E3T00_04610) - 961670..963028 (+) 1359 WP_000021872.1 TrkH family potassium uptake protein -
  E3T00_RS04615 (E3T00_04615) - 963167..964678 (+) 1512 WP_043044620.1 bifunctional metallophosphatase/5'-nucleotidase -
  E3T00_RS04630 (E3T00_04630) comK/comK1 965165..965734 (-) 570 WP_000287265.1 competence protein ComK Regulator
  E3T00_RS04635 (E3T00_04635) - 965944..966162 (+) 219 WP_000876826.1 IDEAL domain-containing protein -
  E3T00_RS04640 (E3T00_04640) - 966243..967229 (-) 987 WP_000668823.1 lipoate--protein ligase -
  E3T00_RS04645 (E3T00_04645) - 967428..967604 (+) 177 WP_000214898.1 YkvS family protein -
  E3T00_RS04650 (E3T00_04650) - 967619..968221 (+) 603 WP_001033867.1 type II CAAX prenyl endopeptidase Rce1 family protein -
  E3T00_RS13295 - 968538..968600 (+) 63 WP_228764722.1 hypothetical protein -
  E3T00_RS04660 (E3T00_04660) - 969139..969240 (+) 102 WP_001790623.1 hypothetical protein -
  E3T00_RS04665 (E3T00_04665) - 969250..969522 (+) 273 WP_072399255.1 lactococcin 972 family bacteriocin -

Sequence


Protein


Download         Length: 189 a.a.        Molecular weight: 22601.83 Da        Isoelectric Point: 9.6091

>NTDB_id=416039 E3T00_RS04630 WP_000287265.1 965165..965734(-) (comK/comK1) [Staphylococcus aureus strain UP_1209]
MYSQNIYVIRKGDMVIRPAFDDDDQRNGSEIIRFDKTRIQNPFKVQKIIERSCKFYGNTYLGKKAETNRITGISSKPPIL
LTPLFPTYFFPTHSDRQNENIWLNMHYIESIKELKNRKCKVTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMIS
KNPDQPIDYNKATLNVFEALTRYSLFEDK

Nucleotide


Download         Length: 570 bp        

>NTDB_id=416039 E3T00_RS04630 WP_000287265.1 965165..965734(-) (comK/comK1) [Staphylococcus aureus strain UP_1209]
ATGTATTCTCAAAATATTTATGTGATACGCAAAGGAGACATGGTTATTCGACCAGCATTTGATGATGACGATCAAAGAAA
CGGTAGTGAAATAATTCGGTTTGACAAAACGCGTATTCAAAATCCTTTTAAAGTCCAGAAAATCATTGAACGCTCTTGCA
AATTTTATGGTAATACTTATCTTGGCAAGAAAGCAGAGACAAACCGCATTACTGGCATTTCTAGTAAACCACCTATTTTA
CTAACACCATTATTTCCAACTTATTTTTTCCCAACACATTCTGACAGACAAAATGAAAATATTTGGTTAAATATGCATTA
TATCGAAAGTATTAAAGAATTAAAAAATCGCAAATGTAAAGTGACATTTATTAATAATGAATCAATCATTCTTCATGTTT
CATACCACAGTTTATGGCATCAATATAACAATTCCATTTTTTACTATTACATGGTAGATAAACAATCTCGCATGATATCA
AAAAATCCCGACCAACCAATAGATTATAATAAAGCCACATTGAATGTGTTTGAAGCATTGACACGCTATTCTTTATTTGA
AGATAAATAA

Domains


Predicted by InterproScan.

(5-156)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7U7EXU5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

100

100

1

  comK/comK1 Staphylococcus aureus N315

100

100

1


Multiple sequence alignment