Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   H7796_RS07940 Genome accession   NZ_CP060640
Coordinates   1653370..1654083 (+) Length   237 a.a.
NCBI ID   WP_136019163.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY764     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1648370..1659083
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7796_RS07930 (H7796_07935) treC 1649440..1651068 (-) 1629 WP_228631365.1 alpha,alpha-phosphotrehalase -
  H7796_RS07935 (H7796_07940) treP 1651135..1653159 (-) 2025 WP_228631367.1 PTS system trehalose-specific EIIBC component -
  H7796_RS07940 (H7796_07945) treR 1653370..1654083 (+) 714 WP_136019163.1 trehalose operon repressor Regulator
  H7796_RS07945 (H7796_07950) - 1654362..1654700 (-) 339 Protein_1517 winged helix-turn-helix transcriptional regulator -
  H7796_RS07950 (H7796_07955) - 1654887..1655744 (+) 858 Protein_1518 VOC family protein -
  H7796_RS07955 (H7796_07960) yaaA 1655786..1656517 (+) 732 WP_012561068.1 peroxide stress protein YaaA -
  H7796_RS07960 (H7796_07965) nrdG 1656691..1657305 (-) 615 WP_021775544.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  H7796_RS07965 (H7796_07970) - 1657320..1657814 (-) 495 WP_014407930.1 GNAT family N-acetyltransferase -
  H7796_RS07970 (H7796_07975) - 1657823..1658758 (-) 936 WP_115225292.1 Gfo/Idh/MocA family protein -
  H7796_RS07975 (H7796_07980) - 1658787..1658933 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27650.82 Da        Isoelectric Point: 9.6307

>NTDB_id=415734 H7796_RS07940 WP_136019163.1 1653370..1654083(+) (treR) [Streptococcus pyogenes strain TSPY764]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLTIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=415734 H7796_RS07940 WP_136019163.1 1653370..1654083(+) (treR) [Streptococcus pyogenes strain TSPY764]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCACCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAGCATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.376

98.734

0.675

Multiple sequence alignment