Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | GVI46_RS22525 | Genome accession | NZ_CP047699 |
| Coordinates | 4405334..4406386 (-) | Length | 350 a.a. |
| NCBI ID | WP_013059177.1 | Uniprot ID | A0A8D4BHW7 |
| Organism | Priestia megaterium strain 5-3 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4400334..4411386
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GVI46_RS22485 | - | 4401349..4402173 (+) | 825 | WP_013059169.1 | YqhG family protein | - |
| GVI46_RS22490 | - | 4402198..4402383 (-) | 186 | WP_013059170.1 | YqzE family protein | - |
| GVI46_RS22495 | comGG | 4402427..4402801 (-) | 375 | WP_098239147.1 | competence type IV pilus minor pilin ComGG | - |
| GVI46_RS22500 | comGF | 4402791..4403228 (-) | 438 | WP_098197258.1 | competence type IV pilus minor pilin ComGF | - |
| GVI46_RS22505 | - | 4403225..4403563 (-) | 339 | WP_013059173.1 | type II secretion system protein | - |
| GVI46_RS22510 | comGD | 4403547..4403984 (-) | 438 | WP_013059174.1 | competence type IV pilus minor pilin ComGD | - |
| GVI46_RS22515 | comGC | 4403971..4404282 (-) | 312 | WP_013059175.1 | competence type IV pilus major pilin ComGC | - |
| GVI46_RS22520 | comGB | 4404297..4405343 (-) | 1047 | WP_013059176.1 | competence type IV pilus assembly protein ComGB | - |
| GVI46_RS22525 | comGA | 4405334..4406386 (-) | 1053 | WP_013059177.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| GVI46_RS22530 | - | 4406656..4407039 (-) | 384 | WP_013059178.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| GVI46_RS22535 | - | 4407301..4407537 (+) | 237 | WP_013059179.1 | DUF2626 domain-containing protein | - |
| GVI46_RS22540 | - | 4407575..4408207 (-) | 633 | WP_098239148.1 | MBL fold metallo-hydrolase | - |
| GVI46_RS22545 | - | 4408416..4408592 (+) | 177 | WP_013059181.1 | DUF2759 domain-containing protein | - |
| GVI46_RS22550 | - | 4408628..4409530 (-) | 903 | WP_029320197.1 | M14 family metallocarboxypeptidase | - |
| GVI46_RS22555 | - | 4409642..4410610 (-) | 969 | WP_013059183.1 | ROK family glucokinase | - |
| GVI46_RS22560 | - | 4410613..4410819 (-) | 207 | WP_013059184.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 350 a.a. Molecular weight: 39625.02 Da Isoelectric Point: 9.0586
>NTDB_id=415512 GVI46_RS22525 WP_013059177.1 4405334..4406386(-) (comGA) [Priestia megaterium strain 5-3]
MTEIEQFATYIIRDACECRSSDVHIVPRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSIDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
MTEIEQFATYIIRDACECRSSDVHIVPRKKDAVIQLRIDQELILKRVISKEMSERLISHFKFLGGMDIGERRKPQNGALT
TSIDHYQVNLRLSTLPTSHDESLVIRLLPHQQSTSLKHLSLFPEHTKKLISLLKFSHGLIIFTGPTGSGKTTTLYTLLHE
VKHLFNRNVITLEDPIEKPSETVLQVQVNERAGITYTTGLKAILRHDPDIIMVGEIRDSETAKIAVRAALTGHLVLTTMH
TKDTKGSLYRLLEFGVSFQEMEQTLVAVAAQRLVEIRCPLCSGKCHPACKKMRKHRQSSIYELLYGKELSAVMREVKGEN
ADYDYKTLRDVILKGIALGYLYPHSLDGWG
Nucleotide
Download Length: 1053 bp
>NTDB_id=415512 GVI46_RS22525 WP_013059177.1 4405334..4406386(-) (comGA) [Priestia megaterium strain 5-3]
TTGACCGAAATTGAACAGTTTGCTACTTACATTATACGAGATGCATGTGAGTGCCGAAGTTCTGATGTGCATATTGTGCC
CCGAAAGAAAGATGCTGTGATTCAGCTGCGAATTGACCAGGAGCTTATTTTAAAGAGGGTTATTTCAAAGGAAATGTCTG
AACGGCTCATTTCGCATTTTAAATTTTTAGGGGGAATGGATATTGGCGAGCGCAGAAAACCTCAAAATGGTGCATTGACC
ACTTCCATTGATCACTATCAAGTAAATTTGCGTTTATCAACCCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTGCCTCATCAACAATCTACATCTCTCAAACATTTATCTCTTTTTCCTGAACACACTAAAAAGCTTATTTCTCTCTTGA
AATTCTCTCATGGATTAATTATTTTTACGGGTCCTACAGGGTCAGGTAAAACCACTACTCTATATACTCTTTTACACGAA
GTAAAGCACCTTTTTAATCGAAATGTTATTACACTAGAAGATCCTATTGAAAAACCGAGTGAAACCGTGCTTCAAGTACA
GGTAAATGAACGGGCGGGGATTACGTACACGACTGGTTTAAAAGCTATATTGCGCCATGACCCAGACATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACTGCCAAAATTGCTGTGAGAGCAGCACTTACCGGACACTTGGTTTTGACAACGATGCAT
ACTAAAGATACAAAAGGATCTTTGTACAGGCTGCTTGAATTTGGGGTTAGCTTTCAAGAAATGGAACAGACTCTTGTAGC
AGTAGCTGCACAGCGCCTTGTAGAAATTCGCTGTCCGCTGTGTTCCGGAAAATGCCACCCCGCTTGTAAAAAAATGAGAA
AGCATCGTCAGTCCAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGTGCAGTGATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTGATTCTAAAAGGAATCGCGCTAGGCTATTTATATCCGCATTCGCTAGA
CGGATGGGGGTAA
TTGACCGAAATTGAACAGTTTGCTACTTACATTATACGAGATGCATGTGAGTGCCGAAGTTCTGATGTGCATATTGTGCC
CCGAAAGAAAGATGCTGTGATTCAGCTGCGAATTGACCAGGAGCTTATTTTAAAGAGGGTTATTTCAAAGGAAATGTCTG
AACGGCTCATTTCGCATTTTAAATTTTTAGGGGGAATGGATATTGGCGAGCGCAGAAAACCTCAAAATGGTGCATTGACC
ACTTCCATTGATCACTATCAAGTAAATTTGCGTTTATCAACCCTTCCTACTTCTCATGATGAAAGTCTTGTTATTCGGCT
TTTGCCTCATCAACAATCTACATCTCTCAAACATTTATCTCTTTTTCCTGAACACACTAAAAAGCTTATTTCTCTCTTGA
AATTCTCTCATGGATTAATTATTTTTACGGGTCCTACAGGGTCAGGTAAAACCACTACTCTATATACTCTTTTACACGAA
GTAAAGCACCTTTTTAATCGAAATGTTATTACACTAGAAGATCCTATTGAAAAACCGAGTGAAACCGTGCTTCAAGTACA
GGTAAATGAACGGGCGGGGATTACGTACACGACTGGTTTAAAAGCTATATTGCGCCATGACCCAGACATTATCATGGTGG
GAGAAATAAGAGATAGTGAGACTGCCAAAATTGCTGTGAGAGCAGCACTTACCGGACACTTGGTTTTGACAACGATGCAT
ACTAAAGATACAAAAGGATCTTTGTACAGGCTGCTTGAATTTGGGGTTAGCTTTCAAGAAATGGAACAGACTCTTGTAGC
AGTAGCTGCACAGCGCCTTGTAGAAATTCGCTGTCCGCTGTGTTCCGGAAAATGCCACCCCGCTTGTAAAAAAATGAGAA
AGCATCGTCAGTCCAGCATATACGAATTGCTTTATGGCAAGGAGCTTAGTGCAGTGATGAGAGAAGTGAAAGGAGAAAAT
GCGGATTATGATTATAAGACGCTCCGAGATGTGATTCTAAAAGGAATCGCGCTAGGCTATTTATATCCGCATTCGCTAGA
CGGATGGGGGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
58.571 |
100 |
0.586 |