Detailed information NTG0415366

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: HUG14_RS09675
• Genome accession: NZ_CP060580
• Coordinates: 1982303..1983373 (-)
• Length: 356 a.a.
• NCBI ID: WP_003131037.1
• Uniprot ID: Q9CG78
• Organism: Lactococcus lactis strain K_LL005
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1977303..1988373

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HUG14_RS09660 (HUG14_09660)	dprA	1977609..1978452 (+)	844	Protein_1863	DNA-processing protein DprA	-
HUG14_RS09665 (HUG14_09665)	topA	1978713..1980843 (+)	2131	Protein_1864	type I DNA topoisomerase	-
HUG14_RS09670 (HUG14_09670)	trmFO	1980915..1982258 (+)	1344	WP_003131150.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
HUG14_RS09675 (HUG14_09675)	xerS	1982303..1983373 (-)	1071	WP_003131037.1	tyrosine recombinase XerS	Machinery gene
HUG14_RS09680 (HUG14_09680)	-	1983668..1983883 (-)	216	WP_233611009.1	hypothetical protein	-
HUG14_RS11735	-	1984045..1984581 (-)	537	Protein_1868	tyrosine-type recombinase/integrase	-
HUG14_RS09695 (HUG14_09695)	-	1985662..1986495 (-)	834	Protein_1869	N(5)-(carboxyethyl)ornithine synthase	-
HUG14_RS09700 (HUG14_09700)	-	1986551..1986727 (-)	177	Protein_1870	CorA family divalent cation transporter	-
HUG14_RS09705 (HUG14_09705)	-	1986861..1987412 (-)	552	WP_134794544.1	Asp23/Gls24 family envelope stress response protein	-
HUG14_RS09710 (HUG14_09710)	-	1987433..1987621 (-)	189	WP_011835142.1	DUF2273 domain-containing protein	-
HUG14_RS09715 (HUG14_09715)	amaP	1987631..1988191 (-)	561	WP_143458612.1	alkaline shock response membrane anchor protein AmaP	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41397.21 Da
• Isoelectric Point: 9.6568

>NTDB_id=415366 HUG14_RS09675 WP_003131037.1 1982303..1983373(-) (xerS) [Lactococcus lactis strain K_LL005]
MKREQLIQNIEKLKHIMPSYVLEYYQSKLTIPYSLNTLYEYLKEYERFFSWLVDSGVADVDKITDVSLSVLENLTKRDLE
SFILYLRERPRLNTRSTRYGVSQTTINRTLSALSSLYKYLTEEVENEDGEPYFYRNVMKKVQTKKKSETLASRAENIKGK
LFLGDETQGFLDYIDNEYEKTLSNRARSSFFKNKERDLAIIALILASGIRLSEAVNVDLRDLNLITMVVEVTRKGGKRDA
VPYAPFAKTYFERYLEVRSQRYKTTAKDTAFFVTLYRDVPSRIDPSSVEKLVAKYSQAFKVRVTPHKLRHTLATRLYAQT
NSQVLVSNQLGHASTQVTDLYTHIINEEQKNALDNL

Nucleotide

• Length: 1071 bp

>NTDB_id=415366 HUG14_RS09675 WP_003131037.1 1982303..1983373(-) (xerS) [Lactococcus lactis strain K_LL005]
ATGAAACGTGAACAATTAATACAAAATATTGAAAAACTAAAACATATCATGCCTTCTTATGTTTTAGAATATTATCAATC
TAAACTTACTATTCCTTATAGTTTGAATACACTTTATGAATATCTTAAAGAATATGAACGTTTCTTTAGTTGGTTGGTCG
ATTCTGGAGTTGCTGATGTTGATAAGATAACTGATGTTTCCCTCTCTGTTTTAGAAAACTTAACTAAACGAGATTTGGAG
TCATTTATCCTCTATCTTAGGGAGAGACCCCGTTTAAATACGCGCTCTACTCGTTATGGGGTAAGTCAAACAACAATTAA
TCGTACTCTATCTGCTCTTTCTAGTCTTTATAAATACCTTACTGAAGAGGTTGAAAATGAAGATGGTGAGCCTTACTTCT
ATCGTAATGTTATGAAGAAGGTACAGACTAAGAAAAAATCCGAAACTTTAGCTTCTCGTGCTGAGAATATTAAAGGGAAG
CTTTTTTTGGGAGATGAAACTCAAGGTTTTCTTGACTATATTGATAATGAATATGAAAAAACATTATCAAATAGAGCTCG
TTCTAGTTTTTTCAAAAATAAAGAACGTGATTTAGCAATTATTGCACTTATTTTAGCCTCTGGTATTCGTCTTTCTGAGG
CAGTTAATGTAGATTTAAGAGATTTAAATCTTATTACTATGGTTGTTGAGGTGACTCGTAAAGGAGGAAAAAGGGATGCT
GTTCCTTATGCTCCTTTTGCCAAAACTTATTTTGAAAGATACTTGGAAGTACGAAGTCAACGTTATAAGACTACAGCGAA
AGATACGGCATTTTTTGTGACACTTTATAGAGATGTTCCTAGCCGAATAGATCCTTCTAGTGTTGAAAAATTAGTTGCTA
AATATTCTCAAGCTTTTAAAGTGCGAGTGACCCCTCACAAGCTTAGACATACACTTGCGACTCGACTTTATGCTCAAACA
AATTCTCAGGTATTGGTGAGCAATCAGTTAGGGCATGCTTCAACTCAAGTTACAGACCTTTATACTCATATTATCAATGA
AGAACAAAAAAATGCTCTAGATAATCTATAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (182-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

3D structure

• AlphaFold DB: Q9CG78

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	76.685	100	0.767