Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   H8S71_RS19695 Genome accession   NZ_CP060417
Coordinates   3867777..3868466 (-) Length   229 a.a.
NCBI ID   WP_003243527.1    Uniprot ID   P42421
Organism   Bacillus subtilis subsp. subtilis strain ONU 559     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3862777..3873466
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H8S71_RS19675 (H8S71_19670) yxeA 3863682..3864029 (-) 348 WP_003227084.1 YxeA family protein -
  H8S71_RS19680 (H8S71_19675) yxdM 3864043..3865911 (-) 1869 WP_070548247.1 ABC transporter permease YxdM -
  H8S71_RS19685 (H8S71_19680) yxdL 3865886..3866659 (-) 774 WP_021481025.1 ABC transporter ATP-binding protein YxdL -
  H8S71_RS19690 (H8S71_19685) yxdK 3866803..3867780 (-) 978 WP_021481026.1 two-component system sensor histidine kinase YxdK -
  H8S71_RS19695 (H8S71_19690) braR 3867777..3868466 (-) 690 WP_003243527.1 two-component system response regulator YxdJ Regulator
  H8S71_RS19700 (H8S71_19695) iolJ 3868574..3869446 (-) 873 WP_064671730.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  H8S71_RS19705 (H8S71_19700) iolI 3869467..3870303 (-) 837 WP_015483926.1 2-keto-myo-inositol isomerase -
  H8S71_RS19710 (H8S71_19705) iolH 3870389..3871258 (-) 870 WP_064671729.1 sugar phosphate isomerase/epimerase -
  H8S71_RS19715 (H8S71_19710) iolG 3871278..3872312 (-) 1035 WP_187001983.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26600.34 Da        Isoelectric Point: 4.8564

>NTDB_id=415118 H8S71_RS19695 WP_003243527.1 3867777..3868466(-) (braR) [Bacillus subtilis subsp. subtilis strain ONU 559]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=415118 H8S71_RS19695 WP_003243527.1 3867777..3868466(-) (braR) [Bacillus subtilis subsp. subtilis strain ONU 559]
TTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTTGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCTGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGCGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P42421

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406