Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   H8S71_RS17135 Genome accession   NZ_CP060417
Coordinates   3349078..3349791 (-) Length   237 a.a.
NCBI ID   WP_003228163.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain ONU 559     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3344078..3354791
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H8S71_RS17115 (H8S71_17110) ghrB 3344223..3345200 (+) 978 WP_072173470.1 D-glycerate dehydrogenase -
  H8S71_RS17120 (H8S71_17115) psdB 3345237..3347177 (-) 1941 WP_041850493.1 lantibiotic ABC transporter permease PsdB -
  H8S71_RS17125 (H8S71_17120) psdA 3347152..3347931 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  H8S71_RS17130 (H8S71_17125) psdS 3348014..3349084 (-) 1071 WP_128422424.1 two-component sensor histidine kinase PsdS -
  H8S71_RS17135 (H8S71_17130) braR 3349078..3349791 (-) 714 WP_003228163.1 two-component system response regulator PsdR Regulator
  H8S71_RS17140 (H8S71_17135) - 3349938..3350147 (+) 210 WP_021480676.1 hypothetical protein -
  H8S71_RS17145 (H8S71_17140) yvcN 3350183..3350947 (-) 765 WP_169037666.1 arylamine N-acetyltransferase -
  H8S71_RS17150 (H8S71_17145) crh 3350948..3351205 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  H8S71_RS17155 (H8S71_17150) whiA 3351229..3352179 (-) 951 WP_003228147.1 DNA-binding protein WhiA -
  H8S71_RS17160 (H8S71_17155) mgfK 3352202..3353155 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  H8S71_RS17165 (H8S71_17160) rapZ 3353157..3354044 (-) 888 WP_003243903.1 RNase adapter RapZ -
  H8S71_RS17170 (H8S71_17165) rppI 3354069..3354545 (-) 477 WP_080478281.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27541.46 Da        Isoelectric Point: 4.6774

>NTDB_id=415103 H8S71_RS17135 WP_003228163.1 3349078..3349791(-) (braR) [Bacillus subtilis subsp. subtilis strain ONU 559]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=415103 H8S71_RS17135 WP_003228163.1 3349078..3349791(-) (braR) [Bacillus subtilis subsp. subtilis strain ONU 559]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCAAGAATAG
TGGAGCTTGGCGGGCTAACGATTTATCCTGATCAAAATGAAGCGGAGTGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAATGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43