Detailed information NTG0415025

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: GT347_RS16370
• Genome accession: NZ_CP047650
• Coordinates: 3536230..3537480 (-)
• Length: 416 a.a.
• NCBI ID: WP_160553227.1
• Uniprot ID: -
• Organism: Xylophilus rhododendri strain KACC 21265
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3531230..3542480

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GT347_RS16350 (GT347_16350)	cyoE	3531909..3532784 (+)	876	WP_160553223.1	heme o synthase	-
GT347_RS16355 (GT347_16355)	-	3532797..3533405 (+)	609	WP_160553224.1	SCO family protein	-
GT347_RS16360 (GT347_16360)	-	3533415..3534383 (-)	969	WP_160553225.1	tripartite tricarboxylate transporter substrate binding protein	-
GT347_RS16365 (GT347_16365)	rpoH	3535041..3536012 (-)	972	WP_407704101.1	RNA polymerase sigma factor RpoH	-
GT347_RS16370 (GT347_16370)	pilA	3536230..3537480 (-)	1251	WP_160553227.1	signal recognition particle-docking protein FtsY	Machinery gene
GT347_RS16375 (GT347_16375)	-	3537508..3539007 (+)	1500	WP_160553228.1	pitrilysin family protein	-
GT347_RS16380 (GT347_16380)	-	3539028..3540376 (+)	1349	Protein_3251	M16 family metallopeptidase	-
GT347_RS16385 (GT347_16385)	rsmD	3540376..3540996 (+)	621	WP_160553229.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
GT347_RS16390 (GT347_16390)	coaD	3541029..3541514 (+)	486	WP_160553230.1	pantetheine-phosphate adenylyltransferase	-

Sequence

Protein

• Length: 416 a.a.
• Molecular weight: 43024.53 Da
• Isoelectric Point: 6.0688

>NTDB_id=415025 GT347_RS16370 WP_160553227.1 3536230..3537480(-) (pilA) [Xylophilus rhododendri strain KACC 21265]
MFSFFKKKPPAATPEPASTTPPQEDAAPTGALGWLKSQLGLAPAPAETPETTTPPPAAPAVAPTPVVAVPVAAPPLPPPP
AAAPLVPPPPLAPPAPAAAPVVAAPAPAAQAEEGGTAERSGWMQRLRGGLRKTGGSIAAVFSDARIDDALYDELEDALLM
ADTGIKATQHLLDDLRRRVKERRSTEPTAVKALLADAIADLLKPLEKPLVIGQHTPTVIMVAGVNGAGKTTSIGKLTKHL
ADAKATVLLAAADTFRAAAREQLGVWADRNLVEIIGQQGGDPAAVSFDAVTAGKARGKDVVLVDTAGRLPTQLHLMQELQ
KIKRVVQKADNSAPHEVLLVIDGNTGQNALAQVRAFDDALGLTGLIVTKLDGTAKGGVLAAIAQERPIPVYFIGVGEKLE
DLETFNAREFAQALLG

Nucleotide

• Length: 1251 bp

>NTDB_id=415025 GT347_RS16370 WP_160553227.1 3536230..3537480(-) (pilA) [Xylophilus rhododendri strain KACC 21265]
ATGTTCAGTTTTTTCAAGAAAAAGCCGCCGGCGGCCACACCGGAACCCGCGTCGACCACTCCCCCGCAGGAAGACGCAGC
GCCGACAGGCGCGCTCGGCTGGTTGAAGAGCCAGCTGGGCCTGGCGCCCGCGCCAGCCGAAACGCCCGAGACCACGACAC
CACCGCCAGCCGCGCCGGCTGTCGCCCCCACGCCCGTCGTGGCGGTGCCGGTGGCCGCGCCGCCGCTACCACCGCCGCCA
GCCGCTGCGCCTCTTGTGCCGCCGCCGCCGCTTGCGCCGCCCGCCCCGGCCGCGGCACCCGTCGTGGCTGCCCCGGCGCC
GGCCGCGCAAGCAGAAGAAGGCGGCACGGCCGAGCGCTCCGGCTGGATGCAGCGCCTGCGCGGCGGCCTGCGCAAGACCG
GCGGCAGCATCGCCGCCGTGTTCAGCGACGCCCGCATCGACGACGCCCTCTACGACGAGCTGGAAGACGCCCTGCTGATG
GCCGACACCGGCATCAAGGCCACCCAGCACCTGCTCGACGACCTGCGCCGCCGCGTCAAGGAGCGCCGCAGCACCGAGCC
CACCGCCGTCAAGGCGCTGCTGGCCGATGCCATCGCCGACCTGCTCAAGCCCCTGGAAAAGCCGCTGGTCATCGGCCAGC
ACACGCCCACCGTGATCATGGTCGCGGGCGTCAACGGCGCCGGCAAGACCACCTCCATCGGCAAGCTCACCAAGCACCTG
GCCGACGCCAAGGCCACCGTGCTGCTGGCCGCCGCCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTGGGCGTGTGGGC
CGACCGCAACCTGGTCGAGATCATCGGCCAGCAGGGCGGCGACCCGGCCGCCGTGAGCTTCGATGCGGTCACCGCCGGCA
AGGCGCGCGGCAAGGACGTGGTGCTGGTCGACACCGCCGGCCGCCTGCCCACCCAGCTGCACCTGATGCAGGAGCTGCAG
AAGATCAAGCGGGTGGTGCAGAAGGCCGACAACAGCGCGCCGCACGAGGTGCTGCTGGTGATCGACGGCAACACCGGCCA
GAACGCCCTGGCCCAGGTGCGCGCCTTCGACGACGCGCTGGGCCTGACCGGGCTGATCGTCACCAAGCTCGACGGCACCG
CCAAGGGCGGCGTGCTGGCGGCCATCGCCCAGGAACGGCCGATCCCGGTCTATTTCATCGGTGTGGGCGAGAAGCTGGAA
GACCTGGAAACCTTCAACGCCCGCGAGTTCGCCCAGGCCTTGCTCGGCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (216-416)

• SRP54-type protein, helical bundle domain (SRP54_N) (135-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	48	100	0.49