Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   GT347_RS09900 Genome accession   NZ_CP047650
Coordinates   2147008..2147406 (-) Length   132 a.a.
NCBI ID   WP_160551796.1    Uniprot ID   A0A857J5A8
Organism   Xylophilus rhododendri strain KACC 21265     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2142008..2152406
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GT347_RS09885 (GT347_09885) - 2143698..2146070 (-) 2373 WP_160551793.1 methyl-accepting chemotaxis protein -
  GT347_RS09890 (GT347_09890) - 2146105..2146635 (-) 531 WP_160551794.1 chemotaxis protein CheW -
  GT347_RS09895 (GT347_09895) - 2146643..2147008 (-) 366 WP_160551795.1 PleD family two-component system response regulator -
  GT347_RS09900 (GT347_09900) pilG 2147008..2147406 (-) 399 WP_160551796.1 PleD family two-component system response regulator Regulator
  GT347_RS09905 (GT347_09905) - 2147469..2147621 (-) 153 WP_268236194.1 rubredoxin -
  GT347_RS09910 (GT347_09910) - 2147759..2148721 (+) 963 WP_160551798.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  GT347_RS09915 (GT347_09915) hemL 2148763..2150052 (+) 1290 WP_160551799.1 glutamate-1-semialdehyde 2,1-aminomutase -
  GT347_RS09920 (GT347_09920) - 2150056..2152149 (-) 2094 WP_160551800.1 TonB-dependent receptor -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14652.90 Da        Isoelectric Point: 7.6342

>NTDB_id=415014 GT347_RS09900 WP_160551796.1 2147008..2147406(-) (pilG) [Xylophilus rhododendri strain KACC 21265]
MSTNVKPCRVLVVDDSNTIRRSAEIFLKQGGHEVTLAEDGFDALAKVNDYEPELIFCDILMPKLDGYQTCAIIKRNPRFA
GTPVVMLSSKDGVFDRARGRMVGCQDYLTKPFTKDQLLTVVQQLAPSQTGAR

Nucleotide


Download         Length: 399 bp        

>NTDB_id=415014 GT347_RS09900 WP_160551796.1 2147008..2147406(-) (pilG) [Xylophilus rhododendri strain KACC 21265]
GTGAGCACGAACGTGAAACCCTGCCGGGTCCTGGTGGTGGACGACAGCAACACCATCCGCCGCAGCGCCGAGATCTTCCT
CAAGCAGGGCGGCCACGAGGTCACGCTGGCCGAGGACGGCTTCGACGCCCTGGCCAAGGTCAACGATTACGAGCCCGAGC
TGATCTTCTGCGACATCCTCATGCCCAAGCTCGACGGCTACCAGACCTGCGCCATCATCAAGCGCAACCCGCGCTTCGCC
GGCACCCCGGTGGTCATGCTCTCCTCCAAGGACGGCGTGTTCGACCGGGCGCGCGGCCGCATGGTCGGCTGCCAGGACTA
TCTGACCAAACCCTTCACCAAGGACCAGCTGCTCACGGTAGTGCAGCAACTGGCCCCCTCGCAGACCGGAGCCCGCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A857J5A8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

51.969

96.212

0.5

Multiple sequence alignment