Detailed information    

insolico Bioinformatically predicted

Overview

Name   rapC   Type   Regulator
Locus tag   H8S71_RS03665 Genome accession   NZ_CP060417
Coordinates   715663..716793 (+) Length   376 a.a.
NCBI ID   WP_169038070.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain ONU 559     
Function   inhibit the DNA-binding function of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 710663..721793
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H8S71_RS03645 (H8S71_03640) - 711291..711749 (-) 459 Protein_668 antitoxin YezG family protein -
  H8S71_RS03650 (H8S71_03645) - 711766..712254 (-) 489 WP_103672140.1 immunity protein YezG family protein -
  H8S71_RS03655 (H8S71_03650) dtxF 712261..714270 (-) 2010 WP_169038072.1 ribonuclease YeeF family protein -
  H8S71_RS03660 (H8S71_03655) - 714478..715500 (+) 1023 WP_187002107.1 hypothetical protein -
  H8S71_RS03665 (H8S71_03660) rapC 715663..716793 (+) 1131 WP_169038070.1 response regulator aspartate phosphatase RapH Regulator
  H8S71_RS03670 (H8S71_03665) phrH 716783..716956 (+) 174 WP_029317430.1 phosphatase RapH inhibitor PhrH -
  H8S71_RS03675 (H8S71_03670) yeeI 717116..717835 (+) 720 WP_003233863.1 YebC/PmpR family DNA-binding transcriptional regulator -
  H8S71_RS03680 (H8S71_03675) yeeK 717969..718400 (+) 432 WP_038828347.1 spore coat protein YeeK -
  H8S71_RS03685 (H8S71_03680) yezE 718514..719098 (+) 585 WP_187002108.1 TetR/AcrR family transcriptional regulator -
  H8S71_RS03690 (H8S71_03685) yesE 719178..719621 (+) 444 WP_038828344.1 nuclear transport factor 2 family protein -
  H8S71_RS03695 (H8S71_03690) yesF 719618..720483 (+) 866 Protein_678 NAD-dependent epimerase/dehydratase family protein -
  H8S71_RS03700 (H8S71_03695) cotJA 720613..720861 (+) 249 WP_003219489.1 spore coat-associated protein CotJA -
  H8S71_RS03705 (H8S71_03700) cotJB 720845..721108 (+) 264 WP_003219491.1 spore coat protein CotJB -
  H8S71_RS03710 (H8S71_03705) cotJC 721123..721692 (+) 570 WP_003233850.1 spore coat protein CotJC -

Sequence

Protein


Download         Length: 376 a.a.        Molecular weight: 44016.25 Da        Isoelectric Point: 5.5844

>NTDB_id=415000 H8S71_RS03665 WP_169038070.1 715663..716793(+) (rapC) [Bacillus subtilis subsp. subtilis strain ONU 559]
MSQAIPSSRVGVKINEWYKMIRQFSVPDAEVLKAEVEQDIQRMEEDQDLLIYYSLMCFRHQLMLDYLEPGQTYGNRPTVT
ELLETIETPQKKLTGLLNYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDEIEKAEFHFKVAEAYYHMKQTHVSMH
HILQALDIYQKNPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALDLAMDIQNDRFIAISLLNIANSYDRSGDDQMAV
EHFQKAAKVSREKVPDLLPKVLFGLSWTLCKTGQTQRAFQFIEEGLDQMTAHSHKFYKELFLFLQAVYKETVDERKIHDL
LSYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQEDILKGECLYAY

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=415000 H8S71_RS03665 WP_169038070.1 715663..716793(+) (rapC) [Bacillus subtilis subsp. subtilis strain ONU 559]
TTGAGTCAAGCCATACCGTCTTCGCGTGTCGGTGTTAAGATTAATGAATGGTACAAGATGATTCGCCAGTTCAGTGTTCC
GGATGCTGAGGTTCTGAAAGCGGAGGTGGAGCAGGACATTCAAAGGATGGAAGAGGATCAGGATTTGCTGATCTATTATT
CTCTGATGTGTTTCCGGCACCAGCTGATGCTTGATTATTTGGAGCCGGGACAAACATACGGGAATCGCCCTACAGTGACA
GAGCTTCTTGAAACGATTGAGACCCCTCAGAAAAAACTCACAGGCCTTTTGAATTACTACTCTTTGTTTTTCCGCGGCAT
GTATGAATTTGATCAAAAAGAATATGTGGAAGCGATCGGGTATTATCGCGAGGCGGAGAAAGAACTGCCGTTTGTGTCAG
ATGAAATTGAGAAAGCGGAATTCCATTTTAAAGTGGCCGAAGCGTATTATCACATGAAGCAAACCCATGTGTCGATGCAT
CATATTCTTCAAGCCTTAGACATTTATCAAAAAAATCCCCTATATAGCATTAGAACGATACAAAGCTTGTTTGTGATCGC
TGGCAACTATGATGATTTCAAACATTATGATAAAGCGCTCCCGCACTTAGAAGCGGCGCTGGATTTGGCAATGGACATTC
AAAATGACAGGTTTATCGCCATTTCTCTATTGAACATCGCGAACAGCTATGACAGATCAGGAGACGATCAGATGGCTGTA
GAACATTTCCAAAAAGCGGCGAAAGTAAGCAGAGAGAAAGTGCCTGATCTGCTTCCGAAAGTCTTGTTTGGATTAAGCTG
GACATTATGTAAGACAGGCCAAACACAGCGGGCGTTTCAGTTCATAGAGGAAGGATTAGACCAAATGACAGCACATTCTC
ACAAATTTTATAAAGAATTGTTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGATGAACGAAAAATTCATGATCTT
TTAAGCTATTTCGAAAAAAAGAACTTGCATGCGTATATTGAAGCGTGTGCCCGGAGTGCTGCCGCTGTTTTTGAAAGCAG
CTGTCACTTTGAACAAGCTGCTGCGTTTTATCGGAAAGTGCTGAAAGCCCAAGAAGATATTCTAAAAGGAGAGTGTTTAT
ATGCCTATTAA

Domains

Predicted by InterProScan.

response regulator aspartate phosphatase H, N terminal (RapH_N)

(5-65)

Tetratricopeptide repeat (TPR_7)

(222-251)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rapC Bacillus subtilis subsp. subtilis str. 168

40.691

100

0.407
  rapF Bacillus subtilis subsp. subtilis str. 168

39.257

100

0.394