Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   GNE05_RS06130 Genome accession   NZ_CP047644
Coordinates   1188796..1189452 (+) Length   218 a.a.
NCBI ID   WP_003155032.1    Uniprot ID   I2C3J8
Organism   Bacillus sp. AM1(2019)     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1183796..1194452
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GNE05_RS06105 (GNE05_06105) oppF 1184325..1185242 (+) 918 WP_017417453.1 oligopeptide ABC transporter ATP-binding protein OppF -
  GNE05_RS06110 (GNE05_06110) - 1185349..1186536 (+) 1188 WP_160182560.1 putative glycoside hydrolase -
  GNE05_RS06115 (GNE05_06115) - 1186654..1187232 (+) 579 WP_007409110.1 GNAT family N-acetyltransferase -
  GNE05_RS06120 (GNE05_06120) spx 1187411..1187806 (+) 396 WP_003155034.1 transcriptional regulator Spx -
  GNE05_RS06125 (GNE05_06125) - 1187864..1188520 (-) 657 WP_014417421.1 TerC family protein -
  GNE05_RS06130 (GNE05_06130) mecA 1188796..1189452 (+) 657 WP_003155032.1 adaptor protein MecA Regulator
  GNE05_RS06135 (GNE05_06135) - 1189604..1190764 (+) 1161 WP_160182561.1 competence protein CoiA family protein -
  GNE05_RS06140 (GNE05_06140) pepF 1190992..1192821 (+) 1830 WP_154817838.1 oligoendopeptidase F Regulator
  GNE05_RS20950 - 1192859..1193026 (-) 168 WP_003155026.1 hypothetical protein -
  GNE05_RS06145 (GNE05_06145) spxH 1193312..1194214 (-) 903 WP_160182562.1 protease adaptor protein SpxH -

Sequence


Protein


Download         Length: 218 a.a.        Molecular weight: 25964.75 Da        Isoelectric Point: 4.1143

>NTDB_id=414861 GNE05_RS06130 WP_003155032.1 1188796..1189452(+) (mecA) [Bacillus sp. AM1(2019)]
MEIERINEHTVKFYMSYGDIEDRGFDREEIWYNRERSEELFWEVMDEVHDEEEFAVEGPLWIQVQALDKGLEIIVTKAQL
SKDGQKLELPIPEDKKQEPADENLDALLDDFQKEEQAESREDKEQKLQFTLRFDDFEDLISLSKLNLNGIKTTLYSFEDR
YYLYADFYEQTDEEVENQLSILLEYAHESSVSIHRLEEYGKLVIADHALYTIKKHFAS

Nucleotide


Download         Length: 657 bp        

>NTDB_id=414861 GNE05_RS06130 WP_003155032.1 1188796..1189452(+) (mecA) [Bacillus sp. AM1(2019)]
ATGGAAATAGAAAGAATTAATGAGCATACTGTAAAATTTTATATGTCTTATGGTGATATTGAAGATCGCGGTTTTGACAG
AGAAGAAATCTGGTACAATCGCGAGCGCAGTGAAGAACTGTTCTGGGAAGTCATGGATGAAGTGCATGATGAAGAAGAAT
TCGCTGTCGAGGGTCCTCTTTGGATTCAGGTTCAGGCATTGGACAAAGGACTGGAAATAATCGTAACAAAAGCCCAGCTT
TCCAAGGACGGACAAAAACTCGAACTGCCGATCCCGGAAGATAAAAAACAAGAGCCGGCAGATGAAAATCTCGATGCTTT
ACTTGATGATTTCCAGAAAGAAGAGCAGGCCGAGAGCCGGGAAGATAAGGAGCAAAAGCTTCAGTTCACTTTGCGGTTCG
ATGATTTTGAGGATCTCATCTCGCTATCAAAATTGAATCTTAACGGAATCAAAACGACCCTGTATTCGTTTGAAGACCGA
TATTATTTATATGCAGATTTTTATGAGCAAACTGATGAAGAGGTTGAAAATCAGCTAAGCATCCTGTTGGAGTACGCGCA
CGAATCATCAGTCAGCATTCACCGTCTTGAAGAATACGGCAAATTGGTGATCGCTGATCATGCGTTATATACAATAAAAA
AACACTTTGCATCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB I2C3J8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

89.45

100

0.895


Multiple sequence alignment