Detailed information NTG0413771

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: GTQ55_RS00590
• Genome accession: NZ_CP047491
• Coordinates: 132968..133990 (+)
• Length: 340 a.a.
• NCBI ID: WP_221296284.1
• Uniprot ID: -
• Organism: Microbulbifer hydrolyticus strain IRE-31
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 127968..138990

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GTQ55_RS00565 (GTQ55_00565)	mutM	128158..128973 (+)	816	WP_161856955.1	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	-
GTQ55_RS00570 (GTQ55_00570)	sugE	129188..129514 (-)	327	WP_161856956.1	quaternary ammonium compound efflux SMR transporter SugE	-
GTQ55_RS00575 (GTQ55_00575)	ggt	129544..131304 (-)	1761	WP_237567756.1	gamma-glutamyltransferase	-
GTQ55_RS00580 (GTQ55_00580)	coaD	131373..131861 (-)	489	WP_161856957.1	pantetheine-phosphate adenylyltransferase	-
GTQ55_RS00585 (GTQ55_00585)	rsmD	131970..132563 (-)	594	WP_161856958.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
GTQ55_RS00590 (GTQ55_00590)	pilA	132968..133990 (+)	1023	WP_221296284.1	signal recognition particle-docking protein FtsY	Machinery gene
GTQ55_RS00595 (GTQ55_00595)	ftsE	134214..134897 (+)	684	WP_161856960.1	cell division ATP-binding protein FtsE	-
GTQ55_RS00600 (GTQ55_00600)	ftsX	134881..135879 (+)	999	WP_161856961.1	permease-like cell division protein FtsX	-
GTQ55_RS00605 (GTQ55_00605)	rpoH	136256..137110 (+)	855	WP_161856962.1	RNA polymerase sigma factor RpoH	-
GTQ55_RS00610 (GTQ55_00610)	-	137375..137752 (+)	378	WP_161856963.1	DUF423 domain-containing protein	-
GTQ55_RS00615 (GTQ55_00615)	trmB	137969..138706 (+)	738	WP_161856964.1	tRNA (guanosine(46)-N7)-methyltransferase TrmB	-

Sequence

Protein

• Length: 340 a.a.
• Molecular weight: 36215.13 Da
• Isoelectric Point: 4.8447

>NTDB_id=413771 GTQ55_RS00590 WP_221296284.1 132968..133990(+) (pilA) [Microbulbifer hydrolyticus strain IRE-31]
MAGVAEPEAPESSPEPVSEAALQPATQDKPKKEGFFARIRRGLSRTSSQFAEGMGNLFLGAKEIDEDLMEELETQLLMAD
VGVDATTEIIDRLTERVSRRELSNGEALYNALQEELAGLLDKVEAPLSIDQAKKPFVILVVGVNGVGKTTTIGKMAHRYL
NEGKSVMLAAGDTFRAAAVEQLQVWGQRHNVPVVAQHTGADSASVIFDAIQSAQSRGVDVVIADTAGRLHNKANLMEELS
KVRRVMGKLDGSAPHEVLLVLDAGTGQNALSQAETFRDSAGVTGLVLTKLDGTAKGGVIFALAQKLGIPVRFIGVGEQAE
DLQPFAAKDFVAALFNRSQG

Nucleotide

• Length: 1023 bp

>NTDB_id=413771 GTQ55_RS00590 WP_221296284.1 132968..133990(+) (pilA) [Microbulbifer hydrolyticus strain IRE-31]
TTGGCTGGCGTTGCCGAGCCAGAGGCGCCCGAATCTTCACCGGAACCTGTGTCCGAAGCTGCACTCCAGCCGGCCACCCA
GGACAAGCCGAAAAAAGAAGGCTTCTTCGCGCGTATCCGCCGCGGCCTGTCGCGTACCAGCAGCCAGTTTGCGGAAGGCA
TGGGCAATCTGTTCCTGGGCGCCAAAGAGATCGACGAAGACCTGATGGAGGAGCTGGAGACCCAGCTGTTGATGGCGGAT
GTGGGAGTGGATGCCACGACCGAGATCATTGACCGCCTTACCGAGCGTGTCTCCCGCCGCGAGTTGTCGAACGGCGAAGC
GCTGTACAACGCCCTGCAGGAAGAGTTGGCCGGACTGCTGGACAAGGTGGAAGCACCACTGTCGATTGACCAGGCCAAGA
AACCGTTTGTGATCCTGGTGGTTGGCGTCAACGGCGTCGGCAAGACCACCACCATCGGCAAGATGGCACACCGCTATCTC
AATGAGGGCAAGTCGGTGATGCTGGCGGCAGGTGATACCTTCCGTGCGGCAGCGGTGGAGCAGCTGCAGGTGTGGGGCCA
GCGCCACAATGTACCGGTGGTGGCCCAGCACACCGGCGCCGACAGTGCCTCGGTCATCTTTGATGCAATACAGTCCGCCC
AGTCCCGCGGTGTGGATGTGGTGATTGCGGATACCGCGGGCCGCCTGCACAACAAGGCGAACCTGATGGAAGAGCTGTCG
AAGGTTCGCCGGGTGATGGGCAAGCTGGACGGTTCCGCACCCCACGAGGTGTTACTGGTGCTGGATGCGGGCACTGGCCA
GAACGCGCTTTCCCAGGCAGAGACCTTCCGGGATTCCGCCGGGGTCACTGGCCTGGTGCTGACCAAGCTGGATGGCACCG
CCAAGGGCGGGGTAATTTTCGCGCTGGCGCAGAAGCTGGGGATTCCGGTACGCTTTATCGGTGTGGGGGAGCAGGCAGAA
GACTTACAGCCGTTTGCGGCGAAGGATTTCGTAGCCGCCCTGTTTAACCGATCGCAGGGGTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (135-335)

• SRP54-type protein, helical bundle domain (SRP54_N) (52-116)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	50.151	97.353	0.488