Detailed information
Bioinformatically predicted
Overview
| Name | comL/pilP | Type | Machinery gene |
| Locus tag | I6A80_RS02650 | Genome accession | NZ_CP060241 |
| Coordinates | 572864..573388 (+) | Length | 174 a.a. |
| NCBI ID | WP_003116136.1 | Uniprot ID | A0A0H2ZIN8 |
| Organism | Pseudomonas aeruginosa strain C-I-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 567864..578388
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6A80_RS02630 (I6A80_000540) | - | 567931..570402 (-) | 2472 | WP_003095841.1 | penicillin-binding protein 1A | - |
| I6A80_RS02635 (I6A80_000541) | pilM | 570587..571651 (+) | 1065 | WP_003110888.1 | type IV pilus assembly protein PilM | Machinery gene |
| I6A80_RS02640 (I6A80_000542) | pilN | 571651..572247 (+) | 597 | WP_003141783.1 | type 4a pilus biogenesis protein PilN | - |
| I6A80_RS02645 (I6A80_000543) | pilO | 572244..572867 (+) | 624 | WP_003116135.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| I6A80_RS02650 (I6A80_000544) | comL/pilP | 572864..573388 (+) | 525 | WP_003116136.1 | type 4a pilus biogenesis lipoprotein PilP | Machinery gene |
| I6A80_RS02655 (I6A80_000545) | pilQ | 573442..575574 (+) | 2133 | WP_003116137.1 | type 4a pilus secretin PilQ | Machinery gene |
| I6A80_RS02660 (I6A80_000546) | aroK | 575586..576104 (+) | 519 | WP_003095833.1 | shikimate kinase AroK | - |
| I6A80_RS02665 (I6A80_000547) | aroB | 576154..577260 (+) | 1107 | WP_003116138.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 19224.07 Da Isoelectric Point: 9.7252
>NTDB_id=413771 I6A80_RS02650 WP_003116136.1 572864..573388(+) (comL/pilP) [Pseudomonas aeruginosa strain C-I-1]
MRARLILSSLLLTMLAGCGANSEFGDLQAYMNEVRARPKGNIEPLPKFQPYEAFTYSASNLRSPFQPPVKIDLTVRQKGN
KVVKPDETRVKQFLEGFNIETFEMVGTLSNAQGTFALVKGAGGVHRVRVGDYLGRNDGKVVGISEGKIDVIEIVPDGEGN
WLERPRSLTLKERS
MRARLILSSLLLTMLAGCGANSEFGDLQAYMNEVRARPKGNIEPLPKFQPYEAFTYSASNLRSPFQPPVKIDLTVRQKGN
KVVKPDETRVKQFLEGFNIETFEMVGTLSNAQGTFALVKGAGGVHRVRVGDYLGRNDGKVVGISEGKIDVIEIVPDGEGN
WLERPRSLTLKERS
Nucleotide
Download Length: 525 bp
>NTDB_id=413771 I6A80_RS02650 WP_003116136.1 572864..573388(+) (comL/pilP) [Pseudomonas aeruginosa strain C-I-1]
ATGAGAGCCCGCCTGATTCTGAGCAGCTTGCTGCTCACCATGCTTGCCGGTTGCGGCGCGAATTCCGAGTTCGGCGATCT
TCAAGCCTATATGAACGAGGTACGTGCTCGACCTAAGGGCAATATCGAGCCTCTGCCGAAGTTTCAGCCATATGAAGCTT
TTACTTATAGCGCTTCGAACCTGCGTAGTCCGTTCCAGCCGCCGGTGAAGATCGACCTGACCGTGCGGCAGAAAGGCAAT
AAGGTGGTTAAACCCGACGAGACACGGGTCAAGCAGTTCCTGGAAGGTTTCAACATCGAAACCTTCGAGATGGTCGGCAC
ACTGTCCAACGCCCAGGGTACCTTCGCCTTGGTGAAGGGCGCGGGTGGCGTGCATCGGGTGAGGGTCGGGGACTACCTGG
GGCGCAACGATGGCAAGGTCGTCGGCATCAGCGAAGGAAAAATAGACGTGATTGAAATCGTTCCTGACGGAGAGGGGAAC
TGGCTGGAGCGTCCGCGCAGCCTGACTCTCAAGGAACGCTCCTGA
ATGAGAGCCCGCCTGATTCTGAGCAGCTTGCTGCTCACCATGCTTGCCGGTTGCGGCGCGAATTCCGAGTTCGGCGATCT
TCAAGCCTATATGAACGAGGTACGTGCTCGACCTAAGGGCAATATCGAGCCTCTGCCGAAGTTTCAGCCATATGAAGCTT
TTACTTATAGCGCTTCGAACCTGCGTAGTCCGTTCCAGCCGCCGGTGAAGATCGACCTGACCGTGCGGCAGAAAGGCAAT
AAGGTGGTTAAACCCGACGAGACACGGGTCAAGCAGTTCCTGGAAGGTTTCAACATCGAAACCTTCGAGATGGTCGGCAC
ACTGTCCAACGCCCAGGGTACCTTCGCCTTGGTGAAGGGCGCGGGTGGCGTGCATCGGGTGAGGGTCGGGGACTACCTGG
GGCGCAACGATGGCAAGGTCGTCGGCATCAGCGAAGGAAAAATAGACGTGATTGAAATCGTTCCTGACGGAGAGGGGAAC
TGGCTGGAGCGTCCGCGCAGCCTGACTCTCAAGGAACGCTCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comL/pilP | Acinetobacter baylyi ADP1 |
36.628 |
98.851 |
0.362 |