Detailed information NTG0413715

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: GTW28_RS19395
• Genome accession: NZ_CP047485
• Coordinates: 3741353..3742498 (+)
• Length: 381 a.a.
• NCBI ID: WP_086344441.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain BJQ0005
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3736353..3747498

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GTW28_RS19370 (GTW28_19370)	albF	3736368..3737648 (+)	1281	WP_046381400.1	pitrilysin family protein	-
GTW28_RS19375 (GTW28_19375)	albG	3737645..3738346 (+)	702	WP_029726080.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
GTW28_RS19380 (GTW28_19380)	ywhL	3738352..3739728 (-)	1377	WP_046381401.1	YncE family protein	-
GTW28_RS19385 (GTW28_19385)	ywhK	3739768..3741123 (-)	1356	WP_046381402.1	YncE family protein	-
GTW28_RS21580 (GTW28_19390)	-	3741120..3741350 (-)	231	WP_024572000.1	hypothetical protein	-
GTW28_RS19395 (GTW28_19395)	rapF	3741353..3742498 (+)	1146	WP_086344441.1	response regulator aspartate phosphatase RapF	Regulator
GTW28_RS19400 (GTW28_19400)	phrF	3742482..3742601 (+)	120	WP_041334633.1	phosphatase RapF inhibitor PhrF	Regulator
GTW28_RS19405 (GTW28_19405)	-	3742699..3743161 (+)	463	Protein_3787	YbaK/EbsC family protein	-
GTW28_RS19410 (GTW28_19410)	speB	3743193..3744065 (-)	873	WP_003227545.1	agmatinase	-
GTW28_RS19415 (GTW28_19415)	speE	3744126..3744956 (-)	831	WP_003227543.1	spermidine synthase	-
GTW28_RS19420 (GTW28_19420)	pbpG	3745159..3747234 (+)	2076	WP_029726084.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45631.11 Da
• Isoelectric Point: 5.1503

>NTDB_id=413715 GTW28_RS19395 WP_086344441.1 3741353..3742498(+) (rapF) [Bacillus subtilis strain BJQ0005]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AITYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=413715 GTW28_RS19395 WP_086344441.1 3741353..3742498(+) (rapF) [Bacillus subtilis strain BJQ0005]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTGATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAATTTCTTCAG
AGGCATGTATGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAAGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATAACTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-290)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.475	100	0.995
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572