Detailed information NTG0413663

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: GTW28_RS06460
• Genome accession: NZ_CP047485
• Coordinates: 1224298..1225251 (+)
• Length: 317 a.a.
• NCBI ID: WP_003245494.1
• Uniprot ID: A0AAE2SG99
• Organism: Bacillus subtilis strain BJQ0005
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1219298..1230251

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GTW28_RS06435 (GTW28_06435)	argF	1221130..1222089 (+)	960	WP_014479432.1	ornithine carbamoyltransferase	-
GTW28_RS06440 (GTW28_06440)	yjzC	1222175..1222354 (+)	180	WP_003245356.1	YjzC family protein	-
GTW28_RS06445 (GTW28_06445)	yjzD	1222400..1222585 (-)	186	WP_003245236.1	DUF2929 domain-containing protein	-
GTW28_RS06450 (GTW28_06450)	-	1222834..1223568 (+)	735	WP_014479433.1	hypothetical protein	-
GTW28_RS06455 (GTW28_06455)	-	1223650..1224207 (+)	558	WP_014479435.1	hypothetical protein	-
GTW28_RS06460 (GTW28_06460)	med	1224298..1225251 (+)	954	WP_003245494.1	transcriptional regulator Med	Regulator
GTW28_RS06465 (GTW28_06465)	comZ	1225266..1225457 (+)	192	WP_046380930.1	ComG operon transcriptional repressor ComZ	Regulator
GTW28_RS06470 (GTW28_06470)	yjzB	1225487..1225726 (-)	240	WP_003232972.1	spore coat protein YjzB	-
GTW28_RS06475 (GTW28_06475)	fabH	1225891..1226829 (+)	939	WP_003232971.1	beta-ketoacyl-ACP synthase III	-
GTW28_RS06480 (GTW28_06480)	fabF	1226852..1228093 (+)	1242	WP_003244890.1	beta-ketoacyl-ACP synthase II	-
GTW28_RS06485 (GTW28_06485)	yjaZ	1228169..1228954 (+)	786	WP_003232967.1	DUF2268 domain-containing protein	-
GTW28_RS06490 (GTW28_06490)	appD	1229146..1230132 (+)	987	WP_003232965.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35310.80 Da
• Isoelectric Point: 4.5457

>NTDB_id=413663 GTW28_RS06460 WP_003245494.1 1224298..1225251(+) (med) [Bacillus subtilis strain BJQ0005]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDQDFQQRIAKLIKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=413663 GTW28_RS06460 WP_003245494.1 1224298..1225251(+) (med) [Bacillus subtilis strain BJQ0005]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGCCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTTAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTGGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTAAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTTCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATTGGTTACGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATC
AAGACTTTCAGCAAAGAATCGCCAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	100	100	1