Detailed information
Bioinformatically predicted
Overview
| Name | tsaP | Type | Machinery gene |
| Locus tag | I5102_RS00670 | Genome accession | NZ_CP060240 |
| Coordinates | 140407..141432 (+) | Length | 341 a.a. |
| NCBI ID | WP_023122440.1 | Uniprot ID | - |
| Organism | Pseudomonas aeruginosa strain G-I-1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 135407..146432
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I5102_RS00645 (I5102_000134) | - | 135595..135912 (-) | 318 | WP_003120685.1 | tetratricopeptide repeat protein | - |
| I5102_RS00650 (I5102_000135) | trkA | 136061..137434 (-) | 1374 | WP_003107053.1 | Trk system potassium transporter TrkA | - |
| I5102_RS00655 (I5102_000136) | rsmB | 137462..138766 (-) | 1305 | WP_003122291.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
| I5102_RS00660 (I5102_000137) | fmt | 138763..139707 (-) | 945 | WP_023104722.1 | methionyl-tRNA formyltransferase | - |
| I5102_RS00665 (I5102_000138) | def | 139762..140268 (-) | 507 | WP_003107059.1 | peptide deformylase | - |
| I5102_RS00670 (I5102_000139) | tsaP | 140407..141432 (+) | 1026 | WP_023122440.1 | LysM peptidoglycan-binding domain-containing protein | Machinery gene |
| I5102_RS00675 (I5102_000140) | dprA | 141567..142655 (+) | 1089 | WP_003118479.1 | DNA-processing protein DprA | Machinery gene |
| I5102_RS00680 (I5102_000141) | - | 142696..143253 (+) | 558 | WP_003097300.1 | L-threonylcarbamoyladenylate synthase | - |
| I5102_RS00685 (I5102_000142) | - | 143263..144240 (-) | 978 | WP_003111202.1 | NADPH:quinone reductase | - |
| I5102_RS00690 (I5102_000143) | hemF | 144431..145348 (+) | 918 | WP_003097311.1 | oxygen-dependent coproporphyrinogen oxidase | - |
| I5102_RS00695 (I5102_000144) | aroE | 145406..146230 (+) | 825 | WP_003111201.1 | shikimate dehydrogenase | - |
Sequence
Protein
Download Length: 341 a.a. Molecular weight: 37585.02 Da Isoelectric Point: 9.5379
>NTDB_id=413655 I5102_RS00670 WP_023122440.1 140407..141432(+) (tsaP) [Pseudomonas aeruginosa strain G-I-1]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWNISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWNISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP
Nucleotide
Download Length: 1026 bp
>NTDB_id=413655 I5102_RS00670 WP_023122440.1 140407..141432(+) (tsaP) [Pseudomonas aeruginosa strain G-I-1]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGAACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACACTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTATGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGAACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACACTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTATGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| tsaP | Acinetobacter baumannii D1279779 |
36.24 |
100 |
0.39 |